Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0425 ATGGAGAGGCAGAGAAGTTTCTCCTTCAAACCCACCAGGCTTATGCTCTTCTCATTCACCATCTTCTCTTCTTTCCTCTTCCTTTCCACCTTCACAATCTGGCTTTCCAAGTCCACTTCTTCACTTCACCACCACCACCACACTCCCCTTCACTTCAACTCTTCTTCTTCTTCTGATGGTGACACAGTTGGTGATAATTTTCAGTCCTTGACTGGCTTCACCCAAAACTTCACTGTAACTGCTGTCAGAATCCCAACTCTGATTGATAACCGTCTTGCTAGGACCCAGAAGAGCCTCTCCGGATTCAAATCTGAAGCTTCAGGCCACCATGCTGATGCTGCTACTGCTGCTGCTAATGCAACTCTGAATTTCACCTCAATGCAAGATTCTGGAACTTCACCTGGAGAGAGATTCAGCGAAGAACAGAAGAAAGTAGAAGCAGCTAGTTTGTTTGAGAAAACCCAGGTTCCAGTTTTGAATAAGGCTGAGAAGGAGACAGTGAAAGGGTGTGATTTAGCAAATGGGTATTGGGTCTTTGATGAAAGCTATCCTCTTTATGCTAGAGATTCATGCCCTTTCATAGATGAGGGGTTTGACTGTGAGGGAAATGGAAGATTGGATAGAAACTACTCTAAGTGGAGATGGCAGCCCAGAGAATGTGACCTTCCAAGGTTCAATGCAACAAAAATGTTGGAAATGATAAGAGGGAAAAGGCTAGTTTTTGTGGGTGATTCGATTAATAGGAACCAATGGGAGTCAATGCTGTGCATGTTATTTGGTGCTGTTAAAGATCCAAAGAGAGTGTATGAGGCGCGTGGACGAAAAATTACTAAGGAGAAGGGGAATTATAGTTTCAGGTTTCTGGATTATCAATGCACAGTTGAATACTATGTCAGTCATTTCTTAGTTCATGAAAGCAAGGCAAGAGTAGGGCAGAAACGAAGACCGACGTTGCGAATTGATGCCATTGATCACGGTTCATCAAGATGGAGAGGAGCTGATATTTTGGTTTTCAATACTGCACATTGGTGGTCACATCACAAAACCCAAGCTGGGGTTTATTACTATCAAGAAGGAAATCTTGTTCATCCCCGGCTAAACGTTTCAACAGCTATGCGGAAAGCTTTGACGACTTGGGCTTCATGGGTGGACAAACGCATAAATCCTAGAAAAACCCAAGTTTTCTTTCGAAGTTCTGCACCATCTCATTTCAGGGGAGGTAATTGGAATTCAGGAGGACATTGTACTGAGGCCACTCATCCTCTTAATGAAACCTTAAGCAGCACTTACCCTGAGAAGAATATAATCATTGAGGAGATAGTAAAGCTGATGAAAACTCCTGTGACATTGTTGAATATAACTAATTTGTCAGAATATAGGATAGATGGTCACCCATCCATTTATGGGAGAAAAACTCAATCCTCAAAGATTCAAGATTGTAGTCATTGGTGTCTTCCAGGGGTGCCAGATACATGGAATGAGCTGTTATATTCTCATTTACAAAGTAGATGA 1512 0.4239 MERQRSFSFKPTRLMLFSFTIFSSFLFLSTFTIWLSKSTSSLHHHHHTPLHFNSSSSSDGDTVGDNFQSLTGFTQNFTVTAVRIPTLIDNRLARTQKSLSGFKSEASGHHADAATAAANATLNFTSMQDSGTSPGERFSEEQKKVEAASLFEKTQVPVLNKAEKETVKGCDLANGYWVFDESYPLYARDSCPFIDEGFDCEGNGRLDRNYSKWRWQPRECDLPRFNATKMLEMIRGKRLVFVGDSINRNQWESMLCMLFGAVKDPKRVYEARGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARVGQKRRPTLRIDAIDHGSSRWRGADILVFNTAHWWSHHKTQAGVYYYQEGNLVHPRLNVSTAMRKALTTWASWVDKRINPRKTQVFFRSSAPSHFRGGNWNSGGHCTEATHPLNETLSSTYPEKNIIIEEIVKLMKTPVTLLNITNLSEYRIDGHPSIYGRKTQSSKIQDCSHWCLPGVPDTWNELLYSHLQSR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0425 503 Pfam PMR5 N terminal Domain 169 221 IPR025846 -
Lja1g0425 503 PANTHER - 120 502 IPR029965 -
Lja1g0425 503 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 120 502 IPR029962 GO:0016413
Lja1g0425 503 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 222 498 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0425 Lja-Chr1 3736729 3739296 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0425 - - gmx:100819457 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0425 1 3736729 3739296 Lja1g0425 1 3736729 3739296 ECH