Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0387 ATGGAAAAAATAGAGCACACAACAGTGAACACCAATGGAATCAAAATGCATGTCGCATCAATTGGCTCAGGCCCAGTCATTCTCTTCCTCCACGGCTTCCCGGAGCTTTGGTACTCCTGGCGCCACCAGCTTCTCTCCCTCTCCGCCCTCGGCTACCGCGCAATCGCCCCTGACCTCCGCGGCTACGGCGACACCGACGCCCCGACCGACTCCTCATCCTACTCCGCCCTCCACATCGTCGGCGACCTCGTCGGACTCCTCGATGCTCTCGCTGTCGACCGCGTCTTTCTCGTCGGCCACGACTGGGGTGCTGCCATGGCTTGGTATTTCGCCTTGTTCAAGCCTGAACGTGTCATCGCCTTGGTCAACATGAGTGTCGTGTTCCGCCCCAGGAACCCTAATAGAAAACCCATTCAGACCATGCGAGCTTTGATGGGGGATGATTACTACATGTGCAGGTTTCAGAATCCTGGGGAGGTTGAAGAAGAGTTTGCCCGTGCTGGTACTGCAAGAATAATAAAGACGTTTCTCACGTCTCGTGATCCACGTGCACCTTCTGCGCCTAAGGAGATAGGATTTGCAGGTTTACCTAACACTTCTATTACTTTACCTTCCTGGCTATCCGAGGAAGATGTCAATTATTATGCCAGCAAATTTGAACAGAAAGGCTTCACTGGCGGGCTAAACTACTATCGCGCTATTGACTTAAACTGGGAGCTCACAGCACCATGGACTGGAGAACAGATCAAAGTGCCGACCAAGTTTATTGTGGGAGACCTGGACAGTACATATAATAGTCTAGGTGCTAAGGAGTACATACATAGTGGTGCCTTTAAGAAAGTAGTACCATACCTGCAAGAACTGGTTGTGATGGAAGGAGTGGCTCACTTTATAAATCAGGAAAGACCAGAAGAGATCAGCGCTCATATATATGACTTCATCAAGAAATTCTAA 954 0.5031 MEKIEHTTVNTNGIKMHVASIGSGPVILFLHGFPELWYSWRHQLLSLSALGYRAIAPDLRGYGDTDAPTDSSSYSALHIVGDLVGLLDALAVDRVFLVGHDWGAAMAWYFALFKPERVIALVNMSVVFRPRNPNRKPIQTMRALMGDDYYMCRFQNPGEVEEEFARAGTARIIKTFLTSRDPRAPSAPKEIGFAGLPNTSITLPSWLSEEDVNYYASKFEQKGFTGGLNYYRAIDLNWELTAPWTGEQIKVPTKFIVGDLDSTYNSLGAKEYIHSGAFKKVVPYLQELVVMEGVAHFINQERPEEISAHIYDFIKKF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0387 317 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Lja1g0387 317 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Lja1g0387 317 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Lja1g0387 317 PANTHER EPOXIDE HYDROLASE 1 317 - -
Lja1g0387 317 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Lja1g0387 317 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Lja1g0387 317 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Lja1g0387 317 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Lja1g0387 317 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Lja1g0387 317 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Lja1g0387 317 Gene3D alpha/beta hydrolase 1 317 IPR029058 -
Lja1g0387 317 Pfam alpha/beta hydrolase fold 25 150 IPR000073 -
Lja1g0387 317 PANTHER HYDROLASE, PUTATIVE-RELATED 1 317 - -
Lja1g0387 317 SUPERFAMILY alpha/beta-Hydrolases 2 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0387 Lja-Chr1 3393120 3396477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0387 1 317 Acyl Lipid Metabolism Gene Families AT4G02340 70.347 3.48e-176 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0387 - - gmx:100799903 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0387 1 3393120 3396477 Lja1g0387 1 3393120 3396477 ECH