Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0379 ATGGCCGATAAGAAGCGGAAGGAGAGGGACGGAGGCAACCGCCAAAAGAAGAAATCGAAGACCACTCAACGGAAGAAGACCGGGCCTCGTTTACCTTCATCTTTGCAGAAATTGGTTAACGGCTTAAACCCTGCCCCCGAGCCCAGTAGCGTCGATTCCGACGACCAGAGCGATTTCTATGAGTATGAGGAGGAACGGGCTGAGGAGGAGTCACGGAAGAACAAGCGATACGACCCTGTATTCGTCAATGATGAACTTGATAGTGAAATTGAGGATGAGATTGTGCCATCTGACGATGAGAATGAGGATGATGATGATGATTACTTTGGGACAAAGAGGAATGCCAATGCTCAGAGTGATGATGATTCTGGAGAGGAAGATGATGGAAGACACGCAAGGATGTTAGAAGGAGTTACTGGTTTGCCAATTGAGGCTTTTGAAGATAATAAGAAGATCAAGAAGAATGCTGTTATAACAGAGCTCTATCCAGAGTCTGAATATAACCCTAGTCGTGATGTTGTGGATGGTGATGGACATGTTAGCGTTGAGGACCTTCTTAGTACTCTTCGTGAAAAACCTGATTATCCAAAACTTAGGAAAAGATTTCAACAAATTGATAAGAATGCTAAATCTATTTCTGCGCCACTTCCAAAGCCAGATCAAGAAAGGGAAGAGAGGAAGGCAGCATATGAAATATCAAAGAAAGATGTTACGAAGTGGCAGCACATTATTCAGAAAAATAGAGAGGCACCAAGTATTTCCTTTGGTGAAAATGTAGATATAGGGTTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCTAGAACTGATTTTGAGAAGAAAATAGCTGCACTGGTTCATGATGAAAAAGTTATGGAAGCTCATAAAAAGGATGGCTCTAGGCTTCTTGAAATGAACAAGGTTTCTATAGAAGATGAGAAGGATAGGCAAAATCGGATTGCTAAAATGAGGAGCCTTCTTTTTCGCCATGAAATGAAGGCAAAGCATATTAAAAAGATAAAGTCTAAGACATTTCATCGTTTGTTGAAGAAAGATAGATTGAAGGCAGAATCTTCCCGAATGCAAATGGACCCCGAAGCTGCTAAGGAATACGCTATGAAACAGGAGCGCGAAAGGGCAGAGGAACGCATGACCCTGAAACACAAAAACCAGAATCGGTGGGCTAGGCGTGTTTTGGAACGTGGTTTAGATAACCAAGATGAAGGAACTCGTGCTGCCATAGCTGAACAACTTCGAAGACATGCTGAATTGACTAGAAAAATGCACACCATGAAGGGTAGTAGCAGCAGCAGTGATGATATGAGCGATGAGGATGATGAAGATGAGAACTCTGCTGGTTCTGATCAGGATAGGACTTACAAGCTTTTGGGAAAAGCGAAAGAAAAGACAATGAAAGTGTTAGAGGAAGAGGACGAAGCTCCCAAGTCAGGATTGCTATCCTTACCTTTTATGAGGCGTGGAATGGAGAAAAGTAAAGAGGCAGCCGTTGGAGAACGCAACCTTGCTCTTCAAGAATTTGAAGATTCCTTGAAGAAGCTTGATAATTCTGGTGGCTCAGAAGATGTAAAAGCTGCATCTACCAGTGGCCGAAGAGTATTCGGAGCTACTAAAGCTCAGATATCTGATGCCAGTAATAAGGTTAAGTCTGATAATTTTTATGGTGGCAGTGACAGTGAGGATGACTTAGGGCCCATGAATGGGGCAAGTGACCTTCTGCAGATGGATGTAAACACTGATTCAGTCTTAGTTAAAGAAGACACTGATACTCACCAGGAATCTATTTTTAAGAACATTGATGAGATAATTCAAAACCCTGGGCCAAAAACTACTATTGATGTCTCCATATTTGTGTCTGATACATGGAAAAAGGCAAAAAACAGAAATGATAAAGACATAAATACCAGGAAGTCTCCAAAGCCTGCAGAGCCTGTTATGCAAGATATAAAAGATAATGAAAAGGAAGTGGGAGAGGATAGTGATACAGATAGTGAAGGACAGATGGTGGATGGAATTCTGTCTTCTGTATCTAAGCCATCATATGAACTTCCTTCTCAAGAGGAGCTCCTTCGGTTAACTTTTGCGGGGGATGACGTAGAAGATGATTTTGAAAAGGATAAGCTGGATATCCTAAATGAAGAAAATCCTGAGCCAGAAAAGCCTCTTCTACTTCCTGGCTGGGGCCAATGGACACATATACAGCAAAAAAAAGGGGTACCGTCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAAGCTCTCAAGAAGAGGAAGGATGCTCAGCTAAAAAATGTGATTATCTCGGAGAAATCAGATAAGAAGGCTGAGAAACTCCATACAAAAGTGTTGCCTTACCCTTTTACTTGCAAAGAGGTCTTTGAACAAAGCATACGTTTGCCCATTGGACCTGAATCCAATCCCGCAACTGTAATGGGAGCTCTTACCAGACCTGAAGTGGTGAAGAGACCTGGCGTTATTATAAAACCAATAGAGTTTGAGGAAGTGAACCCTCATGAAAAAGCAGAGCGACGGAGGGGAGACAATCACAAGTTGAATAAAAATAAAGGCAATGGTGGTAAAAAGACCAAGGTCAAGGGAAAAAGTTAA 2640 0.4197 MADKKRKERDGGNRQKKKSKTTQRKKTGPRLPSSLQKLVNGLNPAPEPSSVDSDDQSDFYEYEEERAEEESRKNKRYDPVFVNDELDSEIEDEIVPSDDENEDDDDDYFGTKRNANAQSDDDSGEEDDGRHARMLEGVTGLPIEAFEDNKKIKKNAVITELYPESEYNPSRDVVDGDGHVSVEDLLSTLREKPDYPKLRKRFQQIDKNAKSISAPLPKPDQEREERKAAYEISKKDVTKWQHIIQKNREAPSISFGENVDIGFSTVGAIASEFEPRTDFEKKIAALVHDEKVMEAHKKDGSRLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSKTFHRLLKKDRLKAESSRMQMDPEAAKEYAMKQERERAEERMTLKHKNQNRWARRVLERGLDNQDEGTRAAIAEQLRRHAELTRKMHTMKGSSSSSDDMSDEDDEDENSAGSDQDRTYKLLGKAKEKTMKVLEEEDEAPKSGLLSLPFMRRGMEKSKEAAVGERNLALQEFEDSLKKLDNSGGSEDVKAASTSGRRVFGATKAQISDASNKVKSDNFYGGSDSEDDLGPMNGASDLLQMDVNTDSVLVKEDTDTHQESIFKNIDEIIQNPGPKTTIDVSIFVSDTWKKAKNRNDKDINTRKSPKPAEPVMQDIKDNEKEVGEDSDTDSEGQMVDGILSSVSKPSYELPSQEELLRLTFAGDDVEDDFEKDKLDILNEENPEPEKPLLLPGWGQWTHIQQKKGVPSWMLKKHEDAQKKRAEALKKRKDAQLKNVIISEKSDKKAEKLHTKVLPYPFTCKEVFEQSIRLPIGPESNPATVMGALTRPEVVKRPGVIIKPIEFEEVNPHEKAERRRGDNHKLNKNKGNGGKKTKVKGKS* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0379 879 MobiDBLite consensus disorder prediction 425 465 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 1 131 - -
Lja1g0379 879 Pfam Utp14 protein 134 843 - -
Lja1g0379 879 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 16 856 IPR006709 GO:0006364|GO:0032040
Lja1g0379 879 MobiDBLite consensus disorder prediction 66 83 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 845 879 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 546 560 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 635 687 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 845 865 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 546 578 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 84 106 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 635 664 - -
Lja1g0379 879 Coils Coil 754 774 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 1 17 - -
Lja1g0379 879 MobiDBLite consensus disorder prediction 26 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0379 K14567 - gmx:100811431 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0379 1 3313915 3321114 Lja1g0379 1 3313915 3321114 ECH