Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0378 ATGGATTTGGAGTTTCAATATCAAGAAGAATACTGGAGGAACTCAAGGGGAGTGCAACTCTTCACGTGCAAATGGTTGCCTTTCTCTTCTCCGAAGGCTCTGGTTTTCCTCTGCCATGGTTATGGCATGGAATGCAGTAGCTTCATGAGAGAATGTGGAGTGCGGCTAGCGTGCGCCCAATACGCTGTTTATGGCATCGATTATGAAGGACATGGGCACTCTGAAGGTGCTCGTTGTTACATACACAAGTTTGAAAACATCGTTAATGACTGTTATGACTTTTTCAGATCAGTTTGTGAGCTACAAGAGTATAGGGGAAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGTGCAGTTACTCTACTTTTGCACAAAAAGGACCCTTCATTTTGGGACGGTGCTGTTCTAGTTGCACCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCCGGTGGTGATCAACTTATTGACTAAAGTGGAAGATATCATACCGAAGTGGAAGATAGTTCCCACAAAAGATGTCATCAGCTCATCTTTCAAAGACCCTGCCAAGCGAGAAAGGATAAGGAGAAACAAATTGATATACCAGGACAAGCCCAGGTTAAAAACAGCATTAGAAATGTTGAGAATCAGCATGAGTCTAGAAGACAGCTTATATAAGGTGACACTACCATTTTTTGTGTTGCATGGAGAAGCAGACACAGTGACTGACCCTGAAGTAAGCAGGGCACTGTATGAGAGAGCAAGTAGCAAAGACAAGACCATAAAATTGTACCCTGGAATGTGGCATGGCTTAACTTCTGGGGAGCCTGATGATAACATTGAAAAGGTTTTTGCAGACATCATAACATGGCTAGATAAGCACGCCAACAATGATTTTGTAGAACCAATTGACAGTTACAACTATGGCATTGAGAAAGTCACAACAGCAGCATCATCAGGTAAGATTGTGGATCAGCAGCAGAAAAACAGGCGAAGAAGCTATCTTTGTGGGTTGAAAGGACCTCGCTTGCTACACCACTCGGCAATGTAG 1038 0.4364 MDLEFQYQEEYWRNSRGVQLFTCKWLPFSSPKALVFLCHGYGMECSSFMRECGVRLACAQYAVYGIDYEGHGHSEGARCYIHKFENIVNDCYDFFRSVCELQEYRGKARFLYGESMGGAVTLLLHKKDPSFWDGAVLVAPMCKISEKVKPHPVVINLLTKVEDIIPKWKIVPTKDVISSSFKDPAKRERIRRNKLIYQDKPRLKTALEMLRISMSLEDSLYKVTLPFFVLHGEADTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGEPDDNIEKVFADIITWLDKHANNDFVEPIDSYNYGIEKVTTAASSGKIVDQQQKNRRRSYLCGLKGPRLLHHSAM* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0378 345 Gene3D alpha/beta hydrolase 2 295 IPR029058 -
Lja1g0378 345 PANTHER PHOSPHOLIPASE-RELATED 8 300 - -
Lja1g0378 345 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Lja1g0378 345 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Lja1g0378 345 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Lja1g0378 345 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
Lja1g0378 345 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 300 - -
Lja1g0378 345 SUPERFAMILY alpha/beta-Hydrolases 6 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0378 Lja-Chr1 3306184 3310916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0378 48 345 Acyl Lipid Metabolism Gene Families AT2G47630 65.902 1.55e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0378 K18368 - mnt:21389635 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0378 1 3306184 3310916 Lja1g0378 1 3306184 3310916 ECH