Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0373 ATGGCAAGCTCAACGAAGCAAGTAATGGTGATCGGCGTAGACGATAGTGAGTACAGCACTTATGCCTTGGAATGGACCCTTGATCACTTGGTAGCCCCTCTTCCCAATAATCCCATCTTCAAGATTGTTCTTGTTTATGCCAAGCCTTCTGTTGCTACTACTGTCGGCTTTGTTGGCCCTGGAATTGGTGAGGTCATCCCTGTTGTGGATGCAGATTTGAAAAGAACTGCTGCCAAAGTGACTGATAGAGCTAAAGAACTCTGCGTCCAGAAATCGGTAACAGACGTAACGGTGGAAGTGATAGAAGGTGATGCTAGAAATGTTCTCTGCGATGTTGTGGAGAAGCACCATGCTTCAATATTGGTTGTGGGTAGTCATGGTTATGGGGCTATCAAAAGGGCGGTTTTAGGGAGTGTAAGTGACTATTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAAACCAAACACTGA 486 0.4547 MASSTKQVMVIGVDDSEYSTYALEWTLDHLVAPLPNNPIFKIVLVYAKPSVATTVGFVGPGIGEVIPVVDADLKRTAAKVTDRAKELCVQKSVTDVTVEVIEGDARNVLCDVVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0373 161 PANTHER BNAA04G29570D PROTEIN 4 160 - -
Lja1g0373 161 PANTHER - 4 160 - -
Lja1g0373 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Lja1g0373 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Lja1g0373 161 PRINTS Universal stress protein signature 6 24 IPR006015 -
Lja1g0373 161 Gene3D HUPs 1 161 IPR014729 -
Lja1g0373 161 Pfam Universal stress protein family 8 155 IPR006016 -
Lja1g0373 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 157 - -
Lja1g0373 161 CDD USP_Like 9 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0373 Lja-Chr1 3278366 3281295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0373 - - lja:Lj5g3v1628990.1 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0373 1 3278366 3281295 Lja1g0373 1 3278366 3281295 ECH