Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0366 ATGAGTTCCAGTCGTCATCCAGAGGTCAAATGGGCACAGAGAGAAGACAAGGTCTATATCACTGTCCAATTGCCTGATTCCAAAGATGCTAAAGTAGATCTTACCCCAGATGGTGTTTTTACCTTCACTGCTAGTGCTGGTGCTGGAGACAAACCATATGAGGTCAAGCTTGAGCTTTTTGACAAGGTCAATGTAGAGGAGAGCAAAATTAATATTGGGGTGCGAAGCATATTCTCTGTGGTGCAGAAGGCAGAGAGTGGATGGTGGAAAAGGTTGTTGCGTGGAGAAGGCAAGCCTCCACATTATGTGAAAGTGGATTGGGATAAATGGGTGGATGAGGATGAAGAAGATGTTGTTGCTGAACCTGATATGGGAGGGATGGACTTCTCGAAATTTGGTGGAATGGGTATGGGCGGTGATGGAGGTCTTGGAGGACTTGGAGGGATGGGTGGAATGGGAGGGATGGGTGGAATGGGAGGATTGGGAGGAATGGAAGGATTGGGAGGAATGGATTTCTCTAAATTTGGTGGGATGGGTGATGATGCAATGGACGATTTTGAGGGAAGTGACGATGAAGAGCAAGAAGTGTCAAAGCCGGGAGAAGCGTCTAAGCCAGCAGAACAAGAGGCTGTCAAGAGCGCCAGTGAAGCAACAACTGAGAAAGCCGAAGCTGCCCCGAGCACATAA 687 0.4818 MSSSRHPEVKWAQREDKVYITVQLPDSKDAKVDLTPDGVFTFTASAGAGDKPYEVKLELFDKVNVEESKINIGVRSIFSVVQKAESGWWKRLLRGEGKPPHYVKVDWDKWVDEDEEDVVAEPDMGGMDFSKFGGMGMGGDGGLGGLGGMGGMGGMGGMGGLGGMEGLGGMDFSKFGGMGDDAMDDFEGSDDEEQEVSKPGEASKPAEQEAVKSASEATTEKAEAAPST* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0366 228 ProSiteProfiles CS domain profile. 4 93 IPR007052 -
Lja1g0366 228 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 3 212 IPR045250 GO:0051879
Lja1g0366 228 SUPERFAMILY HSP20-like chaperones 5 155 IPR008978 -
Lja1g0366 228 CDD p23_hB-ind1_like 7 115 - -
Lja1g0366 228 Pfam CS domain 8 83 IPR007052 -
Lja1g0366 228 MobiDBLite consensus disorder prediction 212 228 - -
Lja1g0366 228 Gene3D - 4 125 IPR008978 -
Lja1g0366 228 MobiDBLite consensus disorder prediction 172 228 - -
Lja1g0366 228 PANTHER BNAC05G01500D PROTEIN 3 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0366 Lja-Chr1 3172920 3175776 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0366 - K15730 mtr:MTR_7g108860 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0366 1 3172920 3175776 Lja1g0366 1 3172920 3175776 ECH