Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0365 ATGGAAACCAGTACGGCCATGGATATCGAGGAACAACCTTCACCACCGACACCCAACAACGTTAAACGCTTTGGACTCAAAAATTCTATTCAAACTAACTTCGGCGACGACTATGTTTTCCAAATCATTCCAAAGGATGATTGGACTGCAATGGCGGTTTCATTGTCAACGAACGCAGTGAAACTGTATTCACCTGTTGCTGGTCAATACTATGGAGACTTCAAGGGCCACTCTTCAACCATCAACCAGATTTTGTTTTCAGGTCCTTCCAATCCCCATGTTCTCAACTCGTGTTCTTCAGATGGCACTATTAGAGCTTGGGACACGCGAACATTTCAGCAGGTTTCTACAATTGATGCTGGTCCTTCTCAAGAGGTCTTCAGCATTTCTCTTGGAGGGCCTAATGGGAATTTGATTGCGGCTGGTTGTAAATCGAAGATACTCTTCTGGGATTGGAGAAATAGGAAGCAAATTGCATGCCTGGAAGACTCTCATGTGGAAGATGTCACTCAGGTTCATTTTGTCCCTGATGAACGAGGCAAGCTTATTTCTGCTTCAGAAGATGGTTTGATCTGCACATTTGATACCACGGGAGATATCAATGATGATGATCATCTAGAGTCAGTGATTAATGTGGGAACTTCCATTGCCAAGGTAGGGCTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACGCATATTGAAACCTTGGGTGTCTGGGACTGGAAAGATGGTAGAAATGAAGTGAACTTCTCAGATGCTCGTACTTTAGCTTCTGAGAGTTGGAATTTGGATCATGTTGACTATTTTGTTGATTGCCATTACTCCAAAGAAGCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTACTTTGGGTTACTTTCCTGTAAAGTACAGTGGAGAGGCAACAATTGGAGGTGCAGAAGCAATTCTTGAGGGTGGCCATACAAGTGTCATTAGGAGTGTTCTCCCCATGTCTAGATTCCATGGTAGTGGACCTTCTAATTGTCCTAGCACTGGAGGTATTTTTGGATGGACTGGGGGGGAAGATGGTAGGCTATGTTGTTGGCTTTCTGATGATTCACCTCAAATAAATCAATCTTGGATTTCAAGCACATTGATTATGAAGCCAGAAAGAATACGCAAGAAAAATCGTCATAGCCCCTACTAG 1179 0.4317 METSTAMDIEEQPSPPTPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWTAMAVSLSTNAVKLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGGPNGNLIAAGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLISASEDGLICTFDTTGDINDDDHLESVINVGTSIAKVGLFGESYQKLWCLTHIETLGVWDWKDGRNEVNFSDARTLASESWNLDHVDYFVDCHYSKEAEKLWVIGGTNAGTLGYFPVKYSGEATIGGAEAILEGGHTSVIRSVLPMSRFHGSGPSNCPSTGGIFGWTGGEDGRLCCWLSDDSPQINQSWISSTLIMKPERIRKKNRHSPY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0365 392 Gene3D - 38 304 IPR015943 GO:0005515
Lja1g0365 392 ProSiteProfiles Trp-Asp (WD) repeats profile. 74 117 IPR001680 GO:0005515
Lja1g0365 392 SUPERFAMILY WD40 repeat-like 37 359 IPR036322 GO:0005515
Lja1g0365 392 SMART WD40_4 67 108 IPR001680 GO:0005515
Lja1g0365 392 SMART WD40_4 154 195 IPR001680 GO:0005515
Lja1g0365 392 SMART WD40_4 111 151 IPR001680 GO:0005515
Lja1g0365 392 Pfam WD domain, G-beta repeat 72 108 IPR001680 GO:0005515
Lja1g0365 392 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 74 111 - -
Lja1g0365 392 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g0365 392 PANTHER UNCHARACTERIZED 22 392 IPR039328 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0365 K24758 - gmx:100787377 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0365 1 3166986 3170094 Lja1g0365 1 3166986 3170094 ECH