Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0364 ATGCTTCCTCTTTCCCTTCTCAAGACTGCTCAAGGCCACCCTATGTTGGTGGAGCTGAAAAACGGGGAGACATACAACGGGCATTTGGTTAATTGCGATACATGGATGAACATCCATCTTCGAGAAGTCATTTGCACCAATAAAGATGGAGATAGATTTTGGCGGATGCCTGAGTGCTACATTCGAGGCAATACAATTAAGTACCTTCGAGTTCCTGATGAGGTTATTGACAAAGTTCAGGAAGAAACCAAGAGCCGTACTGATCGCAAACCACCTGGCGTTGGACGTGGGAGGGGAAGAGGAGGTAGGGAGGAAGGTGCTGGTGGGCGCCCGGCAAAAGGACCTGGGCGTGGTTTTGATGATGGTGCTAAGGGACCTGGTGGCCGTGGCAGAGGCGGCTTAGGTGGAAAGCCTGGTGGAAGTAGAGGTGCAGGGAGAGGTAGAGGTTGA 450 0.5156 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTNKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGGREEGAGGRPAKGPGRGFDDGAKGPGGRGRGGLGGKPGGSRGAGRGRG* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0364 149 SUPERFAMILY Sm-like ribonucleoproteins 3 132 IPR010920 -
Lja1g0364 149 PANTHER SM-LIKE PROTEIN LSM4 1 137 - -
Lja1g0364 149 Pfam LSM domain 6 70 IPR001163 -
Lja1g0364 149 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Lja1g0364 149 MobiDBLite consensus disorder prediction 79 107 - -
Lja1g0364 149 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 137 IPR027141 GO:0006396
Lja1g0364 149 SMART Sm3 5 71 IPR001163 -
Lja1g0364 149 MobiDBLite consensus disorder prediction 79 149 - -
Lja1g0364 149 Gene3D - 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0364 Lja-Chr1 3157145 3165338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0364 K12623 - csin:114302531 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0364 1 3157145 3165338 Lja1g0364 1 3157145 3165338 ECH