Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0363 ATGGAGACGCTGTGTCATTGTTCAAAGTTTCTTCTTCCGCCGGAGGAATCCACCGCCGCCGCCGCTTCTTCTTCTTCTTCTCTTTCTCCGACCACCACCACCACATACGCTCTCGTTATTCTCAATCAACGACTCCCCAGATTCGCTCCTCTGCTTTGGGAACACGCGAAGCTACTAGTGTGTGCCGATGGAGGTGCCAACCGGGTGTTTGATGAAATGCCTCTTTTCTTCCCTCATCAACAACCTTCCTTTGTTCGCTCCAGGTACAAGCCTGACCTAATAAAAGGTGACATGGATTCAATCAGGAGAGAAGTACTTGATTACTATGCAACGCTGGGAACTAAGATAATTGATGAGTCTCAGGATCAGGACACTACAGATTTACACAAATGTGTAGCATACATACGTGACTTTACACCAATTGTTGATAAATCATCACTATGTATTCTTGTTGCTGGAGCACTTGGCGGGAGATTTGACCACGAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTCATTCACCTTCTTCCTAAGAATCATTCTCACAAGATCTTTATTCAATCTTCGGTTGAGGGTCCGCATTGTGGACTCGTTCCCATTGGAATGCCATCTGGAAGTACTACTACGACTGGACTGCGATGGGACCTGAATAACACGGAGATGAGATTTGGAGGTCTAGTAAGCACATCAAATATTGTCAAAGAAGATATAGTAACAGTACAGTCTGATACTGATCTTCTGTGGACTGTTTCTATCAAGAAGCTCTAG 807 0.4449 METLCHCSKFLLPPEESTAAAASSSSSLSPTTTTTYALVILNQRLPRFAPLLWEHAKLLVCADGGANRVFDEMPLFFPHQQPSFVRSRYKPDLIKGDMDSIRREVLDYYATLGTKIIDESQDQDTTDLHKCVAYIRDFTPIVDKSSLCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNHSHKIFIQSSVEGPHCGLVPIGMPSGSTTTTGLRWDLNNTEMRFGGLVSTSNIVKEDIVTVQSDTDLLWTVSIKKL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0363 268 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 29 185 IPR036759 GO:0004788|GO:0005524|GO:0009229
Lja1g0363 268 Pfam Thiamin pyrophosphokinase, catalytic domain 51 177 IPR007371 GO:0004788|GO:0005524|GO:0009229
Lja1g0363 268 Gene3D - 177 267 - -
Lja1g0363 268 PANTHER THIAMINE PYROPHOSPHOKINASE 1 2 266 - -
Lja1g0363 268 CDD TPK 37 263 IPR007371 GO:0004788|GO:0005524|GO:0009229
Lja1g0363 268 Gene3D Thiamin pyrophosphokinase, catalytic domain 36 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Lja1g0363 268 PIRSF TPK1 9 268 IPR016966 GO:0004788|GO:0005524|GO:0009229
Lja1g0363 268 PANTHER THIAMIN PYROPHOSPHOKINASE 2 266 - -
Lja1g0363 268 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 187 267 IPR036371 GO:0009229
Lja1g0363 268 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 38 263 IPR006282 GO:0004788|GO:0006772
Lja1g0363 268 SMART TPK_B1_binding_a_2_a 193 259 IPR007373 GO:0009229|GO:0030975
Lja1g0363 268 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 195 260 IPR007373 GO:0009229|GO:0030975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0363 Lja-Chr1 3145320 3148792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0363 K00949 - gmx:100786303 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0363 1 3145320 3148792 Lja1g0363 1 3145320 3148792 ECH