Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0356 ATGGCACCCAAGCCAGCTGAAGAAGAAGCTCCTCGTGGAGAAACTCTCAAGTACCAGACTTGGGTTTTGAAAGTCTTGATCCACTGTGATGGCTGCACAAAGAGAGTCAAGAAAATTCTTCAGGGAATTGATGGTGTTTACACAACAGAGATTGATCCTCGGCAGCACAAGGTTATTGTCACTGGTAACGTGGATGCTGAGACTCTCATTAGGAGGCTCACAAGATCAGGGAAATCAGTGGAGCTTTGGCCAGAATTGCCTGCTGAGAAGAAAGATAAGAAGCTTGAAAAATCCAAGGGTGGTGACACTAAAAATAAGGAGAAGGAAAACCAAAAGAATAGTGAACCAGTGGGTGATGGTGGTTCCAATGAGGATTGTATAGATGCTGCTGGTGAGGATTCAGATCATTGTGATGATGATGTGTGTGGAGATGCTAGTGGAAGTGGTGGTGGCGGTGAAGGTGGTAAAAAGAAGAAAAAGAAAAAGAAGAAGAAGAACAAGGGGGAAAACGGTGGTTCTGCTCCTCCTAATAATGGAGGAGGAAAAGAAATTAGTACAGTTGATGCACCAGTCCCTCAAAGCATAGTAGCCACTCCCAAGGATCTTATTACTGGCCCTCCAATTCAGCATGTGTATCCATATCCACACATGTACTATTCACCTCCACCACCTCCAGCACCAGCATATGGGTTAAGCTATAACACATCATATCCTGTTTCTAGTGCTTCTTATTCTGTTGGTGCTCCTATGGTGATGCCTATGCATGCTTACTCTGCTGCATACCCTCCACTTCCTCCACCTCCTCCACCATCTGATCCAATCAAGCACTATGGTGATGATGATGACGATGAATACCAAGGTGGATTTTGCTCGATTATGTGA 882 0.4478 MAPKPAEEEAPRGETLKYQTWVLKVLIHCDGCTKRVKKILQGIDGVYTTEIDPRQHKVIVTGNVDAETLIRRLTRSGKSVELWPELPAEKKDKKLEKSKGGDTKNKEKENQKNSEPVGDGGSNEDCIDAAGEDSDHCDDDVCGDASGSGGGGEGGKKKKKKKKKKNKGENGGSAPPNNGGGKEISTVDAPVPQSIVATPKDLITGPPIQHVYPYPHMYYSPPPPPAPAYGLSYNTSYPVSSASYSVGAPMVMPMHAYSAAYPPLPPPPPPSDPIKHYGDDDDDEYQGGFCSIM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0356 293 Gene3D - 17 90 - -
Lja1g0356 293 MobiDBLite consensus disorder prediction 84 206 - -
Lja1g0356 293 Pfam Heavy-metal-associated domain 27 77 IPR006121 GO:0046872
Lja1g0356 293 SUPERFAMILY HMA, heavy metal-associated domain 18 84 IPR036163 GO:0046872
Lja1g0356 293 MobiDBLite consensus disorder prediction 262 293 - -
Lja1g0356 293 ProSiteProfiles Heavy-metal-associated domain profile. 27 82 IPR006121 GO:0046872
Lja1g0356 293 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 6 293 - -
Lja1g0356 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 293 - -
Lja1g0356 293 MobiDBLite consensus disorder prediction 84 114 - -
Lja1g0356 293 CDD HMA 27 81 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0356 Lja-Chr1 3111530 3113156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0356 - - lja:Lj1g3v4901110.1 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0356 1 3111530 3113156 Lja1g0356 1 3111530 3113156 ECH