Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0350 ATGGATTCTCTTTGCTTTGATGACAACAAAGGAAACACTGAAATGAAATCTGTTGAAGAAGATCTCCATGGTGTGGATGATAAATTTGGAGATCCAGAAGTGCTCCCTCGCGTTGGAGATGAGTACCAGGTAGAAATTCCATCACTAACTGCAGCACCTTATCTTTCTCAGCTTGCAAAGAAGACAAAAGATTCAGAAATCAGGGTCAATGTGCCAGAGCCTTTTTCACTAGGATTGCCCATACCTATTATGTGGGCACATTGCAGTTTTGGTTGTGAGAATTCAGAATCTGTCACAAGTGGAGAGGGGAAAGTTAGTTCTGAGCATGAATGTACAAAAGTTAAAGGGGGAAATTTGGGAGGATTTTCAAATTCCCAAAATTCTTCTAAAAGTGATGAGACAGATATTGACTCATGCAAGGGACTAAAAACTGAACTGAATCAGCCAAGAGGCAAGTATCTTCTCCCTGGATTGTTGGATGACCAACCTTGGACAGATATTGAATATGACAGTTTTCTTCTTGGCCTCTATGTATTTGGGAAGAACCTTAATTTGTTAAAGAGATTTGTTGGGAGTAAAAAAATGGGAGACATATTGTCTTTCTATTATGGGAAGTTTTTCAGGTCTAAAGGGCATTCCCGATGGTCAGAGTGCCGGAAGTCAAGAACAAGGCGGTGTGCGCATGGCCAGAAAATATTCATGGGATGGAGGCAACAAGAATTTCTGTCAAGATTATTTTCTCACGTGCCAGGAGAGTGTCAAACTCTATTGGTTGAGATTTCAAGGAATTTTGTGGAGAAAAAAATACTATTTGAAGAATACATATTTGCGCTAAAGGATGCTGTTGGAATTGAATTGCTTATAGCTGCAGTAGGTATTGGCAAAGGGAAGCATGATCTCACTGGCACTGCTGTTGAGCCATCGAAGACTTATCACGTCTCTGTTCGGCCTGAACTACCCATCGGCAAAGCCTGCTCCTCTCTTACATCTGCAGATATAATCAAGTTTCTCACAGGAAATTTTAGATTAAGCAAAGCCCGATCCAGTGATCTCTTTTGGGAAGCTGTTTGGCCTCGCCTTTTAGCAAACGGTTGGCATTCTGAGCAGCCTATGGATCAAGTTGTTTCTGGATCAAAACAATCTTTGGTTTTCCTCATACCTGGTGTTAAGAAATTTTCAAAGAGGAAACTGGTAAAAGGTAACCACTACTTTGATTCTATAAGTGATATGTTGAATAAAGTAGCTTCTGATCCTGGGCTTCTGGAGACAGAAATTCAAGCAACTGAGGGTAGTTCAGATGGGGGAAAAAGGCAAGACAAACGAGATGTAGATGGTTTGCCGAATGGGCAACAATGTCATTACCTTCAATCTCGTTCAAAGTGCAATGAAGATCTCGCGAAACTCACAATTATAGATACAAGCATGGTTCATAATATGGATCAACGGAAAGTGAGACAGATGAGAAGCTTATCTTTTCAAACCATGAGTATATCTACCATCTCAAGCTGCTCTAGTGAATCTGAGCGAGATACATCTGAAGACTCTGAAGATCAGCTTGAACAAGCTAATCCTTCAAGCCCTATTGTAGATCAGGTTGAACAAGCTAATGCTTCATTTACTATAGAACATCAGGTTAAACTTGCTAATTCCTCAAACCATGTGGAAGAATTCCCTGATAAGGGAATGAGCATAGACTCATCAGAGTGTACTCACATTCCCGAGGCCCTCAACACCTCCAAAGTAGAAGCAGAAAATCATAAATTTTATTCTGATCTTGTTCATGATGAGCATTCAAGGGAGATCAATGCGAATCACTTGATTCAGAAGATGACATCTGATTGCACACAATATTTTCCCTGCGATGCAGAAATGCAGAAGCTAAGAGCTTGCAACCATGGAGAGTCTAGCCACAGCACTGGAAGTACTTCTGTCGAAAGAAAGTTTGATTTAAATGAACCGGTGTCACCATCAGATCTGCTTGAAGCATCTGAAGACATGATTTTTTCTGTGGGTTTAGAAAATCACACAAGTTCTCAGGCTAAAGACAGTGTCACTGAGAACCACATGGTTGGAGAAGTTTCTGCAGAAAATTCTGAAACCAGGATGTTGATTGACTTGAATTTTCCTCAGGTTTCACCTGAATTTGGTATTGACTTGGAAATTCCATCCTCACAAAATGACAACCAATGTGCAAATACATTGTCCTCTCAATCTGAGATAACTCAGCTCAATGCTATGCATGATTTTCCTGATGATAATAAGGAGCAACAATCTACTATTGTCAACCTTCGCCAGAGCACAAGGAACCGGCCATTGACTACAAAAGCCTTGGAAGCTCTTCAGTACAGATTTCTCAACTCAACAAAGAGGAAGAGGAAAAACACTGAATCTTCAGAGAATAATTCAAAGTCTCAATGTTTGTGTGTAAATAGTGGGACAATTATTAGTGCTTCTTGTGATAACAGCATTGGAAATTCTATTGCTGACACGAGCGGAGGAGGAGAATATTATCAGGGGATGGAGCTGTAG 2529 0.4045 MDSLCFDDNKGNTEMKSVEEDLHGVDDKFGDPEVLPRVGDEYQVEIPSLTAAPYLSQLAKKTKDSEIRVNVPEPFSLGLPIPIMWAHCSFGCENSESVTSGEGKVSSEHECTKVKGGNLGGFSNSQNSSKSDETDIDSCKGLKTELNQPRGKYLLPGLLDDQPWTDIEYDSFLLGLYVFGKNLNLLKRFVGSKKMGDILSFYYGKFFRSKGHSRWSECRKSRTRRCAHGQKIFMGWRQQEFLSRLFSHVPGECQTLLVEISRNFVEKKILFEEYIFALKDAVGIELLIAAVGIGKGKHDLTGTAVEPSKTYHVSVRPELPIGKACSSLTSADIIKFLTGNFRLSKARSSDLFWEAVWPRLLANGWHSEQPMDQVVSGSKQSLVFLIPGVKKFSKRKLVKGNHYFDSISDMLNKVASDPGLLETEIQATEGSSDGGKRQDKRDVDGLPNGQQCHYLQSRSKCNEDLAKLTIIDTSMVHNMDQRKVRQMRSLSFQTMSISTISSCSSESERDTSEDSEDQLEQANPSSPIVDQVEQANASFTIEHQVKLANSSNHVEEFPDKGMSIDSSECTHIPEALNTSKVEAENHKFYSDLVHDEHSREINANHLIQKMTSDCTQYFPCDAEMQKLRACNHGESSHSTGSTSVERKFDLNEPVSPSDLLEASEDMIFSVGLENHTSSQAKDSVTENHMVGEVSAENSETRMLIDLNFPQVSPEFGIDLEIPSSQNDNQCANTLSSQSEITQLNAMHDFPDDNKEQQSTIVNLRQSTRNRPLTTKALEALQYRFLNSTKRKRKNTESSENNSKSQCLCVNSGTIISASCDNSIGNSIADTSGGGEYYQGMEL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0350 842 MobiDBLite consensus disorder prediction 427 451 - -
Lja1g0350 842 MobiDBLite consensus disorder prediction 501 526 - -
Lja1g0350 842 ProSiteProfiles SANT domain profile. 159 210 IPR017884 -
Lja1g0350 842 PANTHER ATROPHIN-RELATED 5 832 - -
Lja1g0350 842 SUPERFAMILY Homeodomain-like 163 209 IPR009057 -
Lja1g0350 842 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 5 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0350 Lja-Chr1 3074993 3080896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0350 - - lja:Lj1g3v4913230.1 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0350 1 3074993 3080896 Lja1g0350 1 3074993 3080896 ECH