Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0346 ATGATTTCTGGAGGAGATAGGGATGCTGCAGTTCAGGGGCTAGGGTTAGGGTTAGGGTTTGGGTTCGGTCAGGGAAGGTCAGAGATGGTAGAGTTTGAGCTTGAAGAAGGTGAAGCTTGCTCATTCCAGAACCATCAAGACCATGATCGTACCACCACCGTCGATCCTGATGTTGCCCTCTCTTACCTTGATGAAAAAATTGAAGAATATCTAGGACAATTTCAGAAAGATTTTGAAGGTGGGGTCACTGCAGAGAATCTGGGGGCAAAATACGGTGGTTATGGATCATTTTTGCCTATCCATCAACGCTCTCCTGTTTGGCCTCATCCAAAGGCACCACAAAAATATCATAGTCAAGATCCACCGAGATCTCCTAGTAATTTGCATCTGGAGGGTGGGCATAGGGATGCTGTACAATGTTCAACTGGAGCTCAGTCATCAAGAACTGGCCCAGGTTTGGCTAACTCCTCAAGGCTGGCCGCAATTAAGGGACTCCCTGTAGATGATGGAACCAATCAAGAGAATTGCATGACAATCACTAGTACTGAGGCATTACCTTCTAAGTGTGAATCTCTAAACATGAAAGCTACTAGCATATCGGACCAGAAGACACTGAAGGTTCGACTCAAAATGGGCCCTGACAATTTGGCAACTGGGAAAAATGCTGCAATATACAGTGGACTTGGTCTGGACGTGTCACCTTCATCATCACCATCACTGGATGACAGCCCCGCAGAAAGTGAAGGAATTTCTTGTGGTCCTCTAGATACTCCCTTTGAATCTCCAATCAGTATCCTTAAGATTATGACAATCCTCCCTAAGATGTTGTCGCCTCTTCTTGATAATTTCATTGAATTAACTGAAAAGGAAACACGTGCCAGAGATAGCATTGATGAACCTGTTCATGTGGGTGACCCTGAAAGTTCTGGCAAGCTACCAAATGAATCTAATATTGTAAAAGGTGATAGAAAATTGTCAGGAGGGAAGAAAGTGAAATCTCTGGAGGGTTACGAGTCCACAATGGAAGTCGTCAAGGCTTGCAATAAGAAGAATACTCGGAACGATGTTGAGGTGCTATCAAGAAAGGAACAAAGTACAGATGCATTGATGATGGATGAGCTAGTTTCAAAAACCATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAGTGATGACTCAGTAAAAGCTGCCGATGGGCTGGCTGATTCATTGAAGAATGCCAATAAGGGTATGGTGAGGGAGAAAACCTCATCTGATCAGGCAAAAAAGGAGCCGGTGGAGCCAACATCTACTGAATTGAATGCTTTTGCTGAGAGGGCAAAGGGAAGCTCAGGAAGAAAAGTTCTGGGAGATAAAGTTTCCCTTGATGACTTATCATTTAGTGGTGTGAAAGAAAATCATCCAGGAGAAAAAAGTTGCAACTCAACAATAGCTGAATCTAATGTTACCAAAGTTAGAACAGTTTCAAACATTGAGTGCATAGAGCCTTCTAAGAAGGCTAATCAGAGAGGTAGCCCGTGTGATCAAGACAGTCTGACATTACCTGTCGAGACAGAACATCCATTTCCTGGGGGGAAGAAGTCGAAGGGAAGTCAAGGCACCCTGGTTATAGAGAGGGAAAAAGAGAACATCAAGGTTGGATCCTCTTTGGTGTCCAAAATAAAAAAGAATTCTGATGATAGTTCTGCATCAAAAAATGAAACTGAAGGTGTCAAAGTACAAAAGGGTATTGGAAAAGTTAAAGATACTTATAGAGATTTCTTTGGGGAATTGGAAGAAGATGAGGACATAATTGATTCACAGGAAACCCCTTATAATGATAAACAGAAAGAATCTGAGGTGGTTGATAGGAGAACACCCCCAACTAATTGTGGAGCAAAGGAGAGATCAGGTGGTAAGAAAGTTGATAAGCAATTAATAGCCGAAGTATACCCTAAATCAACCGCAAATGTCTGGGGCATTGGAAATGCACATAGTACTAATGCAGCGAATGGGAAAGGGATTCCTCTAATGCTGCCTCATGAGAAGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGGCTTCTTCCTGTTGGCACAAATCCTGATAACCTACCTGAAAAGTGGCTGTGTAGTATGCTTAACTGGCTACCTGACATGAATAGGTGTAGTTTTAGTGAGGATGAAACCACAAAAGCCCTTGTTGCATTATACCAAGGGCCTCCTCCTGATGGTCAAAGAAATTTGCAAAATGTCTCGGGGAGTGCTATGGTGGGAGGAACCATGGCAACTTTCCAGCATCCTGATCAAAGCCAGCTACATAATGATCTGCATGAAGTGCCTGAGGGGAAGAAAAAAGTTGTGAAAGAGATATCAAATCCTACAAATAGAGAAGGCTTTTCTCAATTGTCTAATTCTATAAAGAAAAACTTGCAATCATCGGTGAAAAGTAGGAGCTTAAATGATGTTAACAAATCCCCTGTTTTGAGTGAAGCTGATGGTCTAAGTGAGAAACACACAAGTAAGCAGAGGATACTAGAGCACAATTCTGATAGAGGTGATACTAAGAATATGAAGGTGAAAAGCAGGAGGGGTCCTGATCAAGATTTTTCAAGGCCATCCAAGAAAGGTAAGACTGACAAGGTTCATTCTTCTCATGAAGAGTGGTTTCCAGAACCGAATGGGACCAATAAGAAGGTGGGTCATAGCTCAAGCAGCTCTTTTCCAGCTACTTCTGTTGGCAAAGATCGACCTAGAAAGAAAGATCACTCCTCTTCGAGGTCTTCGAGGGACTCCAAATCTGGAAAAAATAAGCTGCCAGTTTCTGCTGAAAAGACAAAGGTTAATGGTCAAGGTTCCTTCGATGAGGGATTCCTTGATTTGGGGAATTTTGATTCCATTGGTAATGTGAAAAAAAGGAAATTGAAGGAGTATCAGGATGCTCAAACTTGTAGCACAGGTAATCCTCACGTACACGAGAGCAGAATTTCTGAACAGGAGTTCAGTGATTCCAGGAAGGAAAAGAAAGCAAACAATTCAAGATCTGAAGGTAAGGAACGAAGTGCCAGTAAAGGTAGTGGCAGGACTGACAAAAAAGTTAGTCATACAAAGAACCATAAATCCAGGCCAAATCCTGGGCGCAGTCACTCACAGCGGAGCTTGGATGGCATGGACTGTTTCAAAAGGGACATGGGGTCTGTACAGGCTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTGTCTGGCTCACATAAAACCAAAGCTGGTTTCCAGGAAGTGAAAGGCTCACCTGTGGAATCAGTTTCGTCATCACCTATGAGAATTTTAAATGCAGATAAGTTTGCAAACAGCGGAATTATGGGGAAAGATGACTGTCATGATATTGCTGCCATGGATAGTCCAAGAAGATGCTCAGATGGCGAAGATGATCATGCAAGTGATCGATCTGGAACCGCTAGGAGGGACAAATCTTTCACCGTGGCCCAATGGTCTGATTTCCAGAACAAAGGTGTTGATCATATGTCAGAAGATACTAAATCTAAACCTAAAACAACCAGCCATTGTACTAATGGTGGTATGATGGCCCAAGATGGGACACATCCAGGTACAGAGCAGATTAAGCATCAAGGTGAAGACACAACTGATGTTTATAATGCCAATGTCTCTCAGGCAAGGAAGAGTCGCATGGAATTAGGTTTGGAGGACAACAACGAGAGCTGTAAGTCAGGGTCCATTGCAGAAAAAGTCAAGAATACTTGTTCTCCAATCCAACTGCAAGATCAGTCTCATCTGCATAAGGATGGAAAAGTTAAGTTGCAGGAGAAATCTGGGTTCAAGCCAGAACAAAGTGAGAATATACATGCTGGGAAGAAAGATTATACTGGAAAAAGTGAGAGTAGGAAAAAGGATAATCACTTAAGTCGAGGGCATGACTTTCAAGAGGTTAGTATAGATGCCCTATGCAAACAGGAGGCATTACATGCTCCCAGTCAGAATCAGTTGCCAGACGGTGATACTGAAAGATCTTCAAAAATGTCTCTTCCGGAAAGAACTGATCAAGAAGTAATACTTGGAAAAGGGAAGCCTTTGCCATCATTACCCTCCGGAGGATCTCAAATTGAGACATCAAGTCGTTGCCCAAGACCAGTTGGTTCTCATAAAGGAAATGGGGATATGGAAGTTGATCCCTCGAAAGTTGATGATCTGTCAAAGCTGCAAAAAAAGCAATTGAAAAAGGCTGATCATCAAAATGGAACTCAGCAAATTGGTTCAAGAAATCCAGCTCTTAATGGACACAAGTCCAAGGAGCTCGATGCCCCCAGTCCAATTAGAAGGGACTCTTATATCCATGCTGCTAACAATGCTGTGAAAGAGGCTAAAGATCTTAAGCACCTGGCTGATCGTCTTAAGAATTCTGGATCCACTCTTGAGAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAGTTTCTTCATGGAGCCTCTCTGCTAGAATCTGGCAACAATGATAATGCTAAACATAGCGAGATGATTCAGGCAAAGCAAATGTACAGTAGCACGGCAAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCATGGAGGTGGCATATATGAGGGCAATATATTCTACACACACTAGTGCAAGCAGAGACCGTCATGAGTTGCAAACGGCCATGCAAATTATGCCTCTTGGCGAATCTCCATCATCATCTGCCTCTGATGTTGACAATGTTAACAACTCTTCAGCACCTGACAAGGTTACATTATCCAAGAGTGTCAACTCGCCTCAAGTTGCTGGAAACCACATTATTGCTGCACGGAGTCGTCCCAATTTTGTGCGGTTGCTCAATTTTGCTCAGGATGTAAATTATGCCATGGAAGCCTCAAGGAAATCTCGGAATGCTTTTGCTGCTGCTAATTCAAGCCACGCTGTGGGCAAGTATGCAGATGATATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGTTTACTACGATTGGTACGGCTTGCTGTAGAGGCTATTAATCGTTAA 5079 0.4292 MISGGDRDAAVQGLGLGLGFGFGQGRSEMVEFELEEGEACSFQNHQDHDRTTTVDPDVALSYLDEKIEEYLGQFQKDFEGGVTAENLGAKYGGYGSFLPIHQRSPVWPHPKAPQKYHSQDPPRSPSNLHLEGGHRDAVQCSTGAQSSRTGPGLANSSRLAAIKGLPVDDGTNQENCMTITSTEALPSKCESLNMKATSISDQKTLKVRLKMGPDNLATGKNAAIYSGLGLDVSPSSSPSLDDSPAESEGISCGPLDTPFESPISILKIMTILPKMLSPLLDNFIELTEKETRARDSIDEPVHVGDPESSGKLPNESNIVKGDRKLSGGKKVKSLEGYESTMEVVKACNKKNTRNDVEVLSRKEQSTDALMMDELVSKTMKLPLLSSSYSFSDDSVKAADGLADSLKNANKGMVREKTSSDQAKKEPVEPTSTELNAFAERAKGSSGRKVLGDKVSLDDLSFSGVKENHPGEKSCNSTIAESNVTKVRTVSNIECIEPSKKANQRGSPCDQDSLTLPVETEHPFPGGKKSKGSQGTLVIEREKENIKVGSSLVSKIKKNSDDSSASKNETEGVKVQKGIGKVKDTYRDFFGELEEDEDIIDSQETPYNDKQKESEVVDRRTPPTNCGAKERSGGKKVDKQLIAEVYPKSTANVWGIGNAHSTNAANGKGIPLMLPHEKEDNWVQCDRCHKWRLLPVGTNPDNLPEKWLCSMLNWLPDMNRCSFSEDETTKALVALYQGPPPDGQRNLQNVSGSAMVGGTMATFQHPDQSQLHNDLHEVPEGKKKVVKEISNPTNREGFSQLSNSIKKNLQSSVKSRSLNDVNKSPVLSEADGLSEKHTSKQRILEHNSDRGDTKNMKVKSRRGPDQDFSRPSKKGKTDKVHSSHEEWFPEPNGTNKKVGHSSSSSFPATSVGKDRPRKKDHSSSRSSRDSKSGKNKLPVSAEKTKVNGQGSFDEGFLDLGNFDSIGNVKKRKLKEYQDAQTCSTGNPHVHESRISEQEFSDSRKEKKANNSRSEGKERSASKGSGRTDKKVSHTKNHKSRPNPGRSHSQRSLDGMDCFKRDMGSVQASVAATSSSSKVSGSHKTKAGFQEVKGSPVESVSSSPMRILNADKFANSGIMGKDDCHDIAAMDSPRRCSDGEDDHASDRSGTARRDKSFTVAQWSDFQNKGVDHMSEDTKSKPKTTSHCTNGGMMAQDGTHPGTEQIKHQGEDTTDVYNANVSQARKSRMELGLEDNNESCKSGSIAEKVKNTCSPIQLQDQSHLHKDGKVKLQEKSGFKPEQSENIHAGKKDYTGKSESRKKDNHLSRGHDFQEVSIDALCKQEALHAPSQNQLPDGDTERSSKMSLPERTDQEVILGKGKPLPSLPSGGSQIETSSRCPRPVGSHKGNGDMEVDPSKVDDLSKLQKKQLKKADHQNGTQQIGSRNPALNGHKSKELDAPSPIRRDSYIHAANNAVKEAKDLKHLADRLKNSGSTLESTSLYFQAALKFLHGASLLESGNNDNAKHSEMIQAKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRAIYSTHTSASRDRHELQTAMQIMPLGESPSSSASDVDNVNNSSAPDKVTLSKSVNSPQVAGNHIIAARSRPNFVRLLNFAQDVNYAMEASRKSRNAFAAANSSHAVGKYADDISSIKKALDFSFQDVEGLLRLVRLAVEAINR* 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0346 1692 MobiDBLite consensus disorder prediction 233 254 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 808 962 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 990 1029 - -
Lja1g0346 1692 PANTHER CW-TYPE ZINC FINGER 29 1690 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1067 1082 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 894 909 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1259 1308 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 409 430 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 499 541 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1128 1153 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1067 1101 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 808 823 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1254 1308 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1166 1210 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 105 155 - -
Lja1g0346 1692 Gene3D - 673 730 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 295 325 - -
Lja1g0346 1692 Pfam CW-type Zinc Finger 680 726 IPR011124 GO:0008270
Lja1g0346 1692 MobiDBLite consensus disorder prediction 499 513 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 608 632 - -
Lja1g0346 1692 Coils Coil 1449 1469 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1576 1602 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 832 885 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1128 1151 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1325 1440 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 911 937 - -
Lja1g0346 1692 ProSiteProfiles Zinc finger CW-type profile. 675 728 IPR011124 GO:0008270
Lja1g0346 1692 MobiDBLite consensus disorder prediction 1388 1411 - -
Lja1g0346 1692 PANTHER CW-TYPE ZINC FINGER 29 1690 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 976 1054 - -
Lja1g0346 1692 MobiDBLite consensus disorder prediction 139 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0346 Lja-Chr1 3010700 3020350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0346 - - aprc:113860968 2382.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0346 1 3010700 3020350 Lja1g0346 1 3010700 3020350 ECH