Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0343 ATGTTGATACTCCACCACCTTCATAGGTCTCTTGGTCGCATTTTCCACTATCACCACCACCACCTCCTACCCTCCTCAAATTCCCCTTTCTCATTCTCACTCCCTCTCAATCTCAAACTGAAGAAGAAACCTCTCTCTCTCTCACTCTCAAATTCAATGGCAACTTCCCACTCCAACCCCCACCACAAACACGCCAATCGCCTCGCCGCAGAACAAAGCCCTTATCTTCTCCAACACGCTCACAACCCCGTTGATTGGTATCCCTGGGGTGAAGAAGCTTTCGCCGAAGCTCGCCGCCGAGATGCCCCAATCTTCTTATCAATTGGGTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTTGAGTCTTTTGAGAATGAGGAGATTGCCAAGTTGTTGAACGACTGGTTTGTTAGTATTAAGGTGGATCGAGAGGAGCGACCGGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAATGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGGACTTACTTTCCCCCTGATGATAAGTATGGACGACCTGGATTTAAGACTTTACTTAGAAAAGTAAAAGAGGCTTGGGAAGATAAGAGGGATATGCTGGTTAAGAGTGGAGCTTTTGCAATTGAACAGCTTTCTGAGGCATTGTCTGGTCGTTCAGATTCTGATAAATTGGCCGATGGTGTTCCAGATGATGCGATACGTCTATGCTCAGAGCAGCTCTCTGATAGCTACGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTTTACCACTCCAAGAAGTTGGTGGAGGCCGGGAAGTTGGCTAGAGCTCATGAAAGTCAGAAAAAGGTTTTCTTTAGCTTACAATGCATGGCAAAAGGGGGCATTCATGACCATATTGGAGGAGGTTTTCACAGATATAGCGTGGATAAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTGGCTAATGTTTTTTTAGATGCTTTTTCTATCACAAAAGATAACTTCTTTTCATGTGTATCAAGGGATATCCTTGATTATTTAAGGCGAGACATGATTGGTCCAGAAGGTGAAATCTTTTCAGCAGAGGACGCTGACAGTGCAGAGACTGACGGAGCTACAACAAAAAAGGAAGGAGCCTTTTACGTATGGACCAGTAAAGAGGTTGAAGACATACTTGGAGAGCATGCAGCTCTTTTTGAGGAGCATTATTACATAAAGGAGTCGGGAAACTGTGACCTGTCTAGAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGATCCTTCAGAAATGGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAGTTCTAGGCGAATGTAGGCGTAAATTGTTTGAAGTGAGGTCAAGGCGGTCAAGGCCACATTTGGATGATAAAGTTATTGTATCTTGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCCTCCAAGATTCTCAAGGTTGAACCTGAAGGGACCAGATTCAACTTTCCTGTAGTCAGCACTGAACCAAGGGAATACATGAGAGTTGCAGAAAAAGCAGCATTCTTTATCAGGAAGCAACTTTATGATGCGGAGACTCACAGGCTACATCATAGTTTCAGAAATTCTCCATCTAAAGCTCCTGGTTTCTTGGATGATTATGCATTTCTGATTTGTGGATTACTAGATCTCTATGAGTTTGGTGGTGGAATCAACTGGCTTCAATGGGCCGTTGAATTGCAGGAAACCCAGGATGCTCTGTTTCTTGATAAAGATGGAGGTGGTTATTTCAATAATACTGGAGAAGATGCTTCAGTTCTTCTCCGTGTGAAGGAAGACCATGATGGGGCAGAACCTTCTGGGAACTCAGTTTCTGTGATAAATCTTACAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCAGAGCAATATAAACGAAATGCAGAACATTTATTGGCTGTTTTTGAGAAAAGATTGAAAGATACGGCTATGGCAGTGCCTCTGATGTGTTGTGCAGCTGACATGCTGCGTGTACCTTCCCCCAAGCAAGTGGTGGTGGTTGGTGAAAGGACTTGTGAGGAATTTGAAAGCATGCTTGCTACAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGAGTTTTGGGAAGTAAATAACAGCAACATTGCTCTCATGGCAAAGAATAACTATTCAATCAACAAGGTTGTAGCTCTTGTATGCCAACACTTCACTTGTAGCCCCCCTGTGACTAATCATTCTGCACTTCAAGCTCTGCTTTCTAAAACATCCTCGTCTTCGTCGACATAA 2433 0.4361 MLILHHLHRSLGRIFHYHHHHLLPSSNSPFSFSLPLNLKLKKKPLSLSLSNSMATSHSNPHHKHANRLAAEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFENEEIAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLNVFLSPDLKPLMGGTYFPPDDKYGRPGFKTLLRKVKEAWEDKRDMLVKSGAFAIEQLSEALSGRSDSDKLADGVPDDAIRLCSEQLSDSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLVEAGKLARAHESQKKVFFSLQCMAKGGIHDHIGGGFHRYSVDKCWHVPHFEKMLYDQGQLANVFLDAFSITKDNFFSCVSRDILDYLRRDMIGPEGEIFSAEDADSAETDGATTKKEGAFYVWTSKEVEDILGEHAALFEEHYYIKESGNCDLSRMSDPHDEFKGKNVLIERKDPSEMASKYGMSVETYQEVLGECRRKLFEVRSRRSRPHLDDKVIVSWNGLAISSFARASKILKVEPEGTRFNFPVVSTEPREYMRVAEKAAFFIRKQLYDAETHRLHHSFRNSPSKAPGFLDDYAFLICGLLDLYEFGGGINWLQWAVELQETQDALFLDKDGGGYFNNTGEDASVLLRVKEDHDGAEPSGNSVSVINLTRLASMVSGSKAEQYKRNAEHLLAVFEKRLKDTAMAVPLMCCAADMLRVPSPKQVVVVGERTCEEFESMLATAHALYDPNRTVIHIDPNNKEEMEFWEVNNSNIALMAKNNYSINKVVALVCQHFTCSPPVTNHSALQALLSKTSSSSST* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0343 810 CDD SSP411 87 210 IPR004879 -
Lja1g0343 810 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 53 803 IPR024705 -
Lja1g0343 810 SUPERFAMILY Thioredoxin-like 64 192 IPR036249 -
Lja1g0343 810 SUPERFAMILY Six-hairpin glycosidases 254 648 IPR008928 GO:0005975
Lja1g0343 810 Gene3D Glutaredoxin 63 234 - -
Lja1g0343 810 Pfam Protein of unknown function, DUF255 66 225 IPR004879 -
Lja1g0343 810 Gene3D - 536 719 IPR012341 GO:0005975
Lja1g0343 810 PIRSF UCP006402_thioredoxin 48 808 IPR024705 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0343 - - gmx:100777751 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0343 1 2986788 2992805 Lja1g0343 1 2986788 2992805 ECH