Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0336 ATGGAGGATACCCATGAAATTGAGGAGAAGGCGCATGAAGAAGTGATTTCAGACGAAGCATCTGAAAAGAAGCAGGAAACTCGTGATGAAATTCTTTCACGTCACAGGAATGAGATATCAGAGTTGCAGAAAAAGGAACTTGAAATGAAGAAGGGAGCAGCTCGGGGCAGCAAGGCTGAGCAGAAAACTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTACGCTTAAGGAGAAACATGCCAAAGAACTGGCTGCATTAGGCTATAGCAGTGCTAATCGAAATGAAAAGGGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTAATAGTCAACCTGAACATACAAAGGCCAGCAAGGCCAAACAGAGGCGAGACAAAAAAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCTGAGCAGAGTGAAATTATAAGTGATCGAATGATTGAAAATGAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTCTGAGATAAAGCCTGATGGGCACTGCCTATATAGAGCTGTTGAGGATCAGCTGGCTGTTCGATCTGGGGGTAGATCTCCTTACACATATCAAGAACTTCGAGAAATGGTGGCTGCGTACATGAGAAATCACACATCTGATTTCATTCCTTTTTTTCTATCTGAGAATTTGATTGAAGCTGATTCTGATGAATCACTTACTCAGAAGTTCGAAAATTATTGTAAAGAAGTGGAGTCAACAGCGGTTTGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCACATCCTGAAGAAGCATATTTTGATATTTTCAGGGTCCTTCCCAGACGTGGAGATGGGGAAAGAGTACAAATCCAATGATGCTATTGGCTCGTCTAATTCGAGTATTATGCTTTCTTACCACAGGCATGCGTTTGGGCTAGGTGAGCACTACAATTCTTTGGTCCCAACTTGA 975 0.4297 MEDTHEIEEKAHEEVISDEASEKKQETRDEILSRHRNEISELQKKELEMKKGAARGSKAEQKTKKKQVEEEVSQLSATLKEKHAKELAALGYSSANRNEKGNLDSLVKAIAGVSVNSQPEHTKASKAKQRRDKKAQQEAEREQRIQAEQSEIISDRMIENEKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLAVRSGGRSPYTYQELREMVAAYMRNHTSDFIPFFLSENLIEADSDESLTQKFENYCKEVESTAVWGGQLELGALTHILKKHILIFSGSFPDVEMGKEYKSNDAIGSSNSSIMLSYHRHAFGLGEHYNSLVPT* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0336 324 Gene3D - 158 323 - -
Lja1g0336 324 Coils Coil 58 85 - -
Lja1g0336 324 MobiDBLite consensus disorder prediction 1 69 - -
Lja1g0336 324 Pfam OTU-like cysteine protease 178 318 IPR003323 -
Lja1g0336 324 PANTHER DEUBIQUITINASE OTUD6B 24 322 - -
Lja1g0336 324 MobiDBLite consensus disorder prediction 117 144 - -
Lja1g0336 324 ProSiteProfiles OTU domain profile. 172 324 IPR003323 -
Lja1g0336 324 PANTHER OTU DOMAIN CONTAINING PROTEIN 24 322 - -
Lja1g0336 324 MobiDBLite consensus disorder prediction 123 144 - -
Lja1g0336 324 SUPERFAMILY Cysteine proteinases 150 323 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0336 K18342 - gmx:100780620 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0336 1 2937390 2941076 Lja1g0336 1 2937390 2941076 ECH