Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g0333 | ATGGCTGAAGGTGAAGGAGAGGACCGTATTGAGCTTAAGTTCCGCATATTTGATGGAACAGATATAGCACACAGTAATTACCCACCATCTACCACAGTGGGTACCCTTAAGCAAAGGGTAATTGATGAGTGGCCTCAAGACAAAACAGTTACACCGAATTCAGTAAATGACCTAAAACTTATACATGCTGGTAAAGTTTTGGCCGATAGCAACAAAACTCTTGCTGATTCCAGAATAACTTTTGGTGACAACCCCACTGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCGGTAGCAAAAAAGAAGACAGATAAGAATCAGGATGGCAAGAAAAAAATGAATTCATGCTCTTGCACTATCCTTTAG | 369 | 0.4119 | MAEGEGEDRIELKFRIFDGTDIAHSNYPPSTTVGTLKQRVIDEWPQDKTVTPNSVNDLKLIHAGKVLADSNKTLADSRITFGDNPTGAITMHVVVQPPVAKKKTDKNQDGKKKMNSCSCTIL* | 123 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g0333 | 122 | SUPERFAMILY | Ubiquitin-like | 6 | 101 | IPR029071 | - | |
| Lja1g0333 | 122 | PANTHER | MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN | 4 | 122 | - | - | |
| Lja1g0333 | 122 | CDD | Ubl_MUBs_plant | 10 | 98 | - | - | |
| Lja1g0333 | 122 | Gene3D | - | 1 | 104 | - | - | |
| Lja1g0333 | 122 | PIRSF | MUB | 1 | 122 | IPR017000 | - | |
| Lja1g0333 | 122 | Pfam | Ubiquitin-2 like Rad60 SUMO-like | 8 | 120 | IPR039540 | - | |
| Lja1g0333 | 122 | ProSiteProfiles | Ubiquitin domain profile. | 10 | 79 | IPR000626 | GO:0005515 | |
| Lja1g0333 | 122 | PANTHER | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN | 4 | 122 | IPR040015 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g0333 | Lja-Chr1 | 2919355 | 2923249 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g0333 | - | - | lja:Lj1g3v4917510.1 | 244.202 |
Event-related genes