Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0160 ATGGATTTGGTTTCTGAATCAACAAACCCCACCACTCCAACAACAACCCCCTCACCAAACAACAATGGTTTGAGTTCAAGCAGGTATGAGAACCAGAAGCGGCGAGACTGGAACACGTTCTGCCAGTACCTGAGGAACCACCGGCCACCGCTCTCTATGGTGACGTGCGACGGCGCTCACGTGCTGGAGTTCCTCCACTACCTTGACCAGTTCGGGAAGACCAAAGTTCACAACCCCACGTGCCCTTTCTTTGGTCTCCTGAACCCTCCAGCGCCTTGCCCGTGCCCTCTCCGGCAGGCGTGGGGGAGCCTCGATGCACTCATCGGGCGCCTCCGCGCCGCATATGAAGAGAACGGGGGCAGGCCAGAAACCAATCCGTTCGGCGGCCGCGCCGTGAGGACTTACCTCCGTGATGTGCGTGATTTTCAGGCGAAGGCAAGAGGAGTTAGCTATGACAAGAAGAGGAAGAGGCCAAAACCTAACATGAATACTAGTACTAGTTCTAGTAATAGTACTAGTGTTACTTCTTCTCCCACCACTACCTAG 546 0.5495 MDLVSESTNPTTPTTTPSPNNNGLSSSRYENQKRRDWNTFCQYLRNHRPPLSMVTCDGAHVLEFLHYLDQFGKTKVHNPTCPFFGLLNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGGRAVRTYLRDVRDFQAKARGVSYDKKRKRPKPNMNTSTSSSNSTSVTSSPTTT* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0160 181 MobiDBLite consensus disorder prediction 161 181 - -
Lja1g0160 181 Pfam ALOG domain 20 141 IPR006936 -
Lja1g0160 181 PANTHER PROTEIN G1-LIKE2 9 171 IPR040222 -
Lja1g0160 181 PANTHER PROTEIN G1-LIKE5 9 171 - -
Lja1g0160 181 MobiDBLite consensus disorder prediction 146 181 - -
Lja1g0160 181 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g0160 181 MobiDBLite consensus disorder prediction 1 29 - -
Lja1g0160 181 ProSiteProfiles ALOG domain profile. 28 155 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0160 Lja-Chr1 1404295 1405884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0160 - - gmx:102663941 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0160 1 1404295 1405884 Lja5g1847 5 21843694 21845901 PCT