Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g1392 ATGGAGCTAATAGCTTCACACCTATCTCCAACTCTTCCCAGAAAGAAATTTCCTTCTCACACTCTGTTTCATGGGATTATCTCCAGAACAATATGCCATCAAATCCTACTTGAATTTATTACTTTTATAAATAGGAATGGTCGTTTTGAAATATGTGCCCGTAAAAAAGAGAGTTTCAGCGAACTAGAGTATAGCAGAGAAGTCGAAGGAGTAGAGGAACTACATACGACCTCTTCTTTGGACGATGACTTGTCTTTTTTGTCTCTCAGCGAGAAACCTGACAGGAATTTGGCTTTGTTGGACTATTATGAAGCGGAGGAACTTGACTATGATTCCCACCCTGACCATCGAAGCGGATATGTGGCCTTACTTGGGAAGCCAAATGTCGGGAAGAGTACACTAGCAAACCAAATGATTGGTCAAAAGTTGTCTATAGTTACACAGAAACCTCAAACAACAAGGCACCGTATTCTTGGTATATGTTCTGGCTCAGATTATCAGATAATACTTTATGATACACCTGGTGTTCTCAAGAAGGAAATGCACATGTTGGACTCAATGATGATGAAGAATGTTTGCAGTGCTGCAGTTAATGCTGATTGGATTGATGAAGTGTTGAAGGAAGGTGTAGGAGATCTCAAGGATAAACCCCCCAATCTACTGATTCTTAATAAGAAGGATATTATCAAACCTGGGGAATTGCAAAGAAACTTGAGGTTGGAACTCATTGATTGACACAGTAACAGTCACACAAGTTTTCCTAGACGAAACCAAAACGATGCAAAAATTCATGAAACCCCATCAGCACAGGAAAACTATAGTGACATTGTCAGTGAGCACCTAGAAAGATTTTTTGTGGGTGAAATCATTCGAGAAAAGATCTTTATGCAGTACAGAAATGAAATTGCCAGCTACAAGGCTCGGCCTGATGCAAAAGATTTCATACAAGTAGAGATTGTTGTTGAAAAGTATTCACAGAAGATTATGCTTATTGGAAAAGAGGGAAAGGCTTTGAAACTTCTTGCAACAGCTGCCCGTCTGGACACTGAAGACTTTCTGCAGAAGAAAGTTTATCTTGAGATTGAAGTGAAAGTGAGAGAAAATTGGCGACAAGATGAAGGGCTTAAGAATTATGGATATGGGGGCCAGATACCAGTTCTGTAA 1164 0.3969 MELIASHLSPTLPRKKFPSHTLFHGIISRTICHQILLEFITFINRNGRFEICARKKESFSELEYSREVEGVEELHTTSSLDDDLSFLSLSEKPDRNLALLDYYEAEELDYDSHPDHRSGYVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILGICSGSDYQIILYDTPGVLKKEMHMLDSMMMKNVCSAAVNADWIDEVLKEGVGDLKDKPPNLLILNKKDIIKPGELQRNLRLELIDXHSNSHTSFPRRNQNDAKIHETPSAQENYSDIVSEHLERFFVGEIIREKIFMQYRNEIASYKARPDAKDFIQVEIVVEKYSQKIMLIGKEGKALKLLATAARLDTEDFLQKKVYLEIEVKVRENWRQDEGLKNYGYGGQIPVL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g1392 387 Hamap GTPase Era [era]. 116 380 IPR005662 GO:0003723|GO:0005525
Lele56g1392 387 CDD Era 116 250 IPR030388 GO:0005525
Lele56g1392 387 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 275 380 IPR009019 GO:0003723
Lele56g1392 387 Gene3D - 113 254 IPR027417 -
Lele56g1392 387 ProSiteProfiles Type-2 KH domain profile. 290 367 IPR004044 GO:0003723
Lele56g1392 387 TIGRFAM era: GTP-binding protein Era 119 364 IPR005662 GO:0003723|GO:0005525
Lele56g1392 387 TIGRFAM small_GTP: small GTP-binding protein domain 121 233 IPR005225 GO:0005525
Lele56g1392 387 Pfam 50S ribosome-binding GTPase 121 201 IPR006073 GO:0005525
Lele56g1392 387 Pfam KH domain 315 370 IPR004044 GO:0003723
Lele56g1392 387 Gene3D - 279 383 IPR015946 -
Lele56g1392 387 PANTHER GTPASE ERA 77 373 IPR005662 GO:0003723|GO:0005525
Lele56g1392 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 244 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g1392 Lele-ChrLele56 16996493 17000757 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele56g1392 56 16996493 17000757 Lele56g1392 56 16996493 17000757 ECH