Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0541 ATGGCTGCCTTTTCTCCTCCTCCTCTGTGTTTTGTTCTGCTGTGGATTCTAGGGTTTGGGTCTTGGTCTATTGCTTATGCTTTCAAGGTTCCTTTCAGAGTAAACGATGTGCTTCCAGTTCTTCCTCGTGGAATTTCGTGGCCTGTGCTTAATAACTTCCACAGTGCCGTGGATTTGCTTCCGTATTTTGTTGGGTCCGTGACTCCCAACAATTCCTCGATTGAGTGGAAAGGAGCGTGCTTTTATGAGAATAAAGCTAAGCTGGTGTTCACCGCTGGGGACAGGGAGGATCCAGGCTTGGGAGGTGGCATTCTCTATCTCCAGACATCTGCTGCTCACAGCTGGACCTGTATGGATCTCTATGTGTTTGCAACACCCTACAGAATAACATGGGATTACTACTTCTCTTCTAGAGAACATACCTTGAAATTTGACTCATGGGAAGAGCCTGCAGAGATGGAATATGTCAAGCAACACGGGGTTTCTGTGTTTCTTATGCCATCAGGGATGCTGGGAACTATGCTATCCCTAATTGATGTCTTACCTCTCTTCTCTAACACTGCGTGGGGTCAGAAAGCCAACTTAGATTTCCTGAAGAAACACATGGGAGCTACATTTGAGAAACGTAGTAAGCCTTGGCGTGCGACTATAAATCCTGCAGATGTTCATTCAGGAGATTTCTTAGCTGTGTCAAAGATCCGTGGCAGGTGGGGAGGATTTGAGACATTGGAAAAGTGGGTAACTGGTGCATTTGCTGGTCATACTGCGGTTTGCTTAAAAGATGAAATGGGCAATTTATGGGTTGGCGAATCAGGGCATGAGAATGAAAAGGGTGAAGAAATAATTGTGGTAATACCATGGGATGAATGGTGGGAACTGGCTCTTAAAGATAATTCTAATCCCCAGATAGCCTTGCTTCCACTGCATCCCGAGTTGCGTGCAAAATTTAACTCTACTGCTGCATGGGAGTATGCTCGGAGTATGTCAGGCAAGCCATATGGTTATCATAACATGATATTTAGTTGGATTGACACAGTAGCCGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACTAGAGTGCAACCAGATTATGCTGCAAATATGTGGAATGAAGCTTTAAATAAGCGGTTAGGGACTGAGGGTTTGGCTCTGCATGAAATTCTAGCTGAGACCGAGAAGCAAGGGATAGCTTTCGATCAATTACTTACCATTCCAGAACAAGATGAATGGGTATATAGTGATGGAAAATCAACCACCTGTGTTGCCTTTATTCTCTCAATGTACAAAGAGGCTGGAATATTTGGACCTGTTTCCAGCTCCATTCAAGTAACTGAGTTTACTATTCGTGACGCGTATATGCTCAAGATTTTTGAGGATAACCAAACACGACTACCAAGTTGGTGCAACAGTGAGAATGACAAGCTCCCTTTCTGCCAGATTCTAGGAGAATATAGAATGGAGCTGCCTGGCTACAACACTTTGGAGCCCTACAGCAACATGAATGAACACTGCCCTTCCCTTCCCTCAACTTATGACAGGCCCTCACGATGTTAA 1581 0.4459 MAAFSPPPLCFVLLWILGFGSWSIAYAFKVPFRVNDVLPVLPRGISWPVLNNFHSAVDLLPYFVGSVTPNNSSIEWKGACFYENKAKLVFTAGDREDPGLGGGILYLQTSAAHSWTCMDLYVFATPYRITWDYYFSSREHTLKFDSWEEPAEMEYVKQHGVSVFLMPSGMLGTMLSLIDVLPLFSNTAWGQKANLDFLKKHMGATFEKRSKPWRATINPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEMGNLWVGESGHENEKGEEIIVVIPWDEWWELALKDNSNPQIALLPLHPELRAKFNSTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRVQPDYAANMWNEALNKRLGTEGLALHEILAETEKQGIAFDQLLTIPEQDEWVYSDGKSTTCVAFILSMYKEAGIFGPVSSSIQVTEFTIRDAYMLKIFEDNQTRLPSWCNSENDKLPFCQILGEYRMELPGYNTLEPYSNMNEHCPSLPSTYDRPSRC 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0541 526 Gene3D endopeptidase domain like (from Nostoc punctiforme) 221 350 - -
Lele56g0541 526 PANTHER OS01G0793500 PROTEIN 24 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0541 Lele-ChrLele56 3962250 3965535 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0916 53 18797267 18800547 Lele56g0541 56 3962250 3965535 hybridization
Lele54g0899 54 15521661 15524964 Lele56g0541 56 3962250 3965535 hybridization