Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0503 ATGCAGTCCAATGAGGCATCTTCTTCCATGGAAGTTGGGGCTGTACCATCTGAGCCCAAAGCTTTACCACCAAAGCCTAATTTTGATCCTTTGAAACCTCATGAGATGTCTGATGGTCGAGTTCAATTTCGGAAGGTTTCTGTTCCACAACACCGTTATACTCCTCTCAAGAAAGCTTGGATGGATATTTATACTCCAGTATATGAACAGATGAAAGTTGACATCCGTATGAATTTAAAGGCTCGGAAGGTAGAGTTGAAGACAAGACCAGATACACCTGACATCAGTAACCTGCAAAAATGTGCTGATTTCGTACATGCTTTCATGCTGGGATTTGATGTCATAGACGCCGTTGCCCTTCTGCGGTTAGATGAGCTTTATGTCGAATCTTTTGAGATAAAGGATGTTAAAACACTTAGAGGGGACCACCTGTCTCGTGCTATAGGAAGATTATCCGGTAAAGGTGGTAAAACGAAGTTTGCAATTGAGAATGCAACAAAGACAAGGATTGTGATTGCTGACACCAAAATTCACATATTAGGATCTTTTGCTAACATTAAGATTGCTAGGGACTCTCTTTGTAGCCTAATCTTGGGGTCCCCAGCAGGTAAGGTATATTCAAAACTTAGAGCAGTTACTGCTAGACTGGCTGAAAGTCCTCTTCTGTGGCTGTTTAGAGGATCCATTGAATGCATGGAGCACAACGATGGCAACAAGGTTCCACTTAAACTGGACTGGGATCGACTCTTGCCTACGCGAGACGACGAGCCCCCACCCGCGCTCATCATTGAGCCTTCCTCCGATTCTCTCTCCCAACCCTCAAAATTGACTGCCACGGGCCTCAATCAGCAATCTCCAGTCGCTGATAACCTAGAATGGCTTAGTGATAGTAAACTTATAGAGTTACTCCAAGGGAAAAAACGCACCTTGGAGACCACTGGTCCGAAATTGCCTGACAAAGGCGAAAAACTTCGAGCCCTTATCAAGCAATATGAAGATGAGCTGGCTCTCAGGGAAAGAAGCTTGGAGGATAACCTAGAACAGCTTAGTGATGGTAAACTTGAGGAGTTTGTTCAAGAGGAAAAACGCACCCTGGAGACCACCGATCCGAAATTGCCTGACAAAGGTGAAAAACTTCGAGCCCTTATCAAGCAACTAGGTCGCAGGAAAAGGACATTTCTGGACAAGGGCATGGGAATAGAGATTGAAATGCATGAGTTAGGTCGTCCTGTTTTATGCATGAAGTTGATGCAAATGAGAAGCCCAGACCAGCTACACACTCAAGTATTGTTGGTGAGCACAAAATTTGATGGGCTGAAAGTCAAGCTTGATTCCGATAAGGAACCTGATGATTTGATGTCTTCTAAGTGGCTAAAAGGCGGGTCTATTGGCTTTAGGCAAGAAAATGAATCATCAAAAGCACAGCTGCCGTCCTCGTTTGTATCTTCTACTGATTGTCAGAAAATCAATGCATTTAATAATGAGTTATCACATTTCAAGCATGCTCACAATCACAAAATGAGACATAATGAAGACTTTTCACAGAAGAAAAGAAAGAGAGATCAACCATCTTCAAGACAATCGCCATTCCAATGCCCTAGCAATATTTCCAGATCTAAAACTCCTAGTGATGATGAAAGTCCCAGAGCAACTTCCACATTCTCTCTGCAGAGAATCGGGGAAAAGCTATCTGCCCGGTTTACAAAATTGAAGGATGCTTTCAAGGCAATTCGATCAGATGGCTCAAGGTCTAGGAAGGATCAGCTCATTATTCTTGATGAAGAGGATGATGACCTCTATCATTTGGATCAAATAGATGGAGATGACAAACTTGTTGAACGGTATTTGATTGAAGAATGGAGATATTTGGATCAAGAATCTATGTGTTCAGATATTTCTATTGCAGATGGAATATGGAAGAATCTTGATTGTAAAATCAAAGAAAGAATCATCACTTTTGGGAGGCAGTGGTTCCAACCTGAAGAAGCATCTGATTTGAGAGTGAGAATACGTGCTTTGCTTAAAATCGAATTCTACAAGTCACATAAGCAAAACAATATCTCTACAGACTCTGGTGACCATCCATGA 2088 0.4224 MQSNEASSSMEVGAVPSEPKALPPKPNFDPLKPHEMSDGRVQFRKVSVPQHRYTPLKKAWMDIYTPVYEQMKVDIRMNLKARKVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAVALLRLDELYVESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAESPLLWLFRGSIECMEHNDGNKVPLKLDWDRLLPTRDDEPPPALIIEPSSDSLSQPSKLTATGLNQQSPVADNLEWLSDSKLIELLQGKKRTLETTGPKLPDKGEKLRALIKQYEDELALRERSLEDNLEQLSDGKLEEFVQEEKRTLETTDPKLPDKGEKLRALIKQLGRRKRTFLDKGMGIEIEMHELGRPVLCMKLMQMRSPDQLHTQVLLVSTKFDGLKVKLDSDKEPDDLMSSKWLKGGSIGFRQENESSKAQLPSSFVSSTDCQKINAFNNELSHFKHAHNHKMRHNEDFSQKKRKRDQPSSRQSPFQCPSNISRSKTPSDDESPRATSTFSLQRIGEKLSARFTKLKDAFKAIRSDGSRSRKDQLIILDEEDDDLYHLDQIDGDDKLVERYLIEEWRYLDQESMCSDISIADGIWKNLDCKIKERIITFGRQWFQPEEASDLRVRIRALLKIEFYKSHKQNNISTDSGDHP 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0503 695 CDD KH-I 145 191 - -
Lele56g0503 695 Coils Coil 328 348 - -
Lele56g0503 695 MobiDBLite consensus disorder prediction 506 524 - -
Lele56g0503 695 FunFam RNA-binding protein PNO1 124 220 - -
Lele56g0503 695 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 125 218 IPR036612 GO:0003723
Lele56g0503 695 MobiDBLite consensus disorder prediction 501 553 - -
Lele56g0503 695 PANTHER RIBONUCLEASE Y 4 218 - -
Lele56g0503 695 Gene3D K Homology domain, type 1 124 226 IPR036612 GO:0003723
Lele56g0503 695 MobiDBLite consensus disorder prediction 255 277 - -
Lele56g0503 695 MobiDBLite consensus disorder prediction 1 31 - -
Lele56g0503 695 MobiDBLite consensus disorder prediction 525 553 - -
Lele56g0503 695 SMART kh_6 125 198 IPR004087 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0503 Lele-ChrLele56 3668249 3679380 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0937 54 15803352 15809901 Lele56g0503 56 3668249 3679380 hybridization