Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele56g0163 ATGATTGATATATGTTATGGCGATCGAAAGCAATTAAAGAAATGCTATGACTCAACCCATCACAGTTGCCGTCTTTACCCGAAATCGAACACTAGACCTATAGTGGCCACGAGGGTCAGTAATGGCGATGATGGCGCGTTTGATGCTGCCCCACAACAGTCTTCCCCTCCTCCTTCTGGTTGGGTGTTACTTACGGTCTTATGCGACATGGAAGAAGTGAAGAGTACCTCTTCCTGCCTCGGTGATGGTTATATGGCCTTTTTTGTTCGCATGTTAGGTTTAGATCATGATCCTCTTGATAGAGAACAGGCTATAATTGCTCTGTGGAAATATTCACTTAGCGGAAAGCAGTGTGTTGATACTTTAATGCGATTTCCTGGCTGTATTAATCTCACTGTGAACCTCCTCAGATCAGATTCTAGTTCATCATGTGAAGCAGCTGCAGGCCTTTTGCGATCTCTATCCTCAGTCAATCTATACAGGAATTTGAATATTGAGGAACATGTGGACGTCATTTCCATAGATCAATTTTTCCTGCAGGCAAAGTTCTTAACTTATGATCCTGAAGGGTCCAAAGTCATTAAAAAGGAAGCAAAAAATGCGTTGCTGGAATTTGTTAAGGATGAATATCATAAAATTCTTGTCGTTGAGGAAGGTCTGGTTCCTGTACCACTGATTGGTGCTGAGGCATACAAGTCATTGTCCCCTGGTCTGCATTCATGGCCCAAATTACCAGATGGTACAAAGATTGAACGGGCTTCTCTAAAACCTTCCAGCTATGGTGCATCAGAATTACTTCTTGGACTTCATATTGATGATAAGAGTGCTAACATAGAGGAAGCAAAATTGAATGCGATTGTGGAACGGACACAACAACAATTCCTTGCTCGTATTGGGGCTATAGAATGGGAAGGAAAAAGTGCATCTGATTCTGAAAGCTCTGATAGGCAACAACTTACGCTTTTACCTTGGTTGGATGGTGTTGCTCGCTTGGTACTTATTCTAGAACTAGAAGATAAGTCCGCCATAAAAGGGGCTGCAGAGTCAATAGCTGACGTATCTATCAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAAGCATTTAGTTCGGCTTTTGAATTGTGATGACGATGCTGTCAGATTGGCTGTAACTCATGCTCTGGAGAGGTTGTCTGCCAGCAATGGAGTCTGCCAGAAGATTGAATCTGAGGGAGCATTAGGTCCTTTAATTAATATTCTAAAATGCTCAGAGATTTCTGAAACTATTGCAGAAAAGTCTTTGCGTACAATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAATTGGAGTTTTATGATGGACCAGTTAATGGATCTAAGAAGACTTTTAGTGGAGTTAGAAATGATGCTTCTTCAGCTAGCTTTAGTACCACTGAATATCCGATATCAAAGACCACTACCAGGAATGATGTCTTGGATTCTGCTTTTGTAGCCCGCCTTGTTGAGATTCTGAAGTCCTCTTCTCCCAGTTTACAAGCAAAAGCTGCATCAGTTCTTGAGTTCGTTTCACTGACTGACCCAACTGTGGTCTCTAGTATATCTGTAGATATCGAATCTGCTCTGGATGCTGTCTTTCAGCAAAAGATTTTGAGAATTTCAGGTGGAGAACCTGATGTTGAAGATCAGGTTTCAGAAGCATACCCGATTGAAGTTGAAGAAGCTGGGCTTGCCGTATCAGCAGCATCCTGGTTAATGACAAGACTACTCGACTCTCAGCATTTTCGCGAAAAAGTAAATTCCTTGCATTTCATCGGCTTGCTTCGAAAAATCCTAAAGTCTTGTATTCCTCTCCACAGCAAAGACTGGGTGGCTGCTTGCCTCGTTAAACTCAGCTCTCTCTCCACTGACAACCCAAGTCTTGATCCAATCAATGAGGATGAATCTGCTGTTGTAGAACTGAACAGAATAATATCTGAAGAAGTGGAGAATTCTGCTAGAGCCATTGTAGCTGAGGGGGCAATAGACCCATTGGTGAGGCTGATAGAAGAAGGAAGAGAAAGGGCGGTTGAAGCGGGATTGGCTATATTGTATAATCTGAGCATGGACCCTGAGAACCATTCATTGATTGTGGCTGCTGGTGCAGTTCCTGTATTGAGAAGGATTGTGCTCTCTCACAAAGGCCACAGTGGGAAAAGGCACTTCATTTACTCAGGAATTTGCCTACTTGAGATGATGGGCTTCATTCAAGCATACAAGTCTTCAAATGATTTTCTTTTATTTGATAATGCAAAGAGCAGAGAATTTCATTGTAGAAGACGACCCGCCATGTTTTGCTTATCTAACTTTTCCTCCATAACCAAGACTGTTGCTCAAGCCAACCTACCCGAAAGGGATTCATCTTCTCAGCCCGTACGAAGCATTGATGCCAGACCTCCCCTTCTCTCCTCAAAACCAAAAACCATCACTTTACCCGGAAAGAAGCGCAACCGTTCTCCCCCTCGACCCACTGTAGTCCAAATCGAACGCATTGTCGGCGCCGGCAGCTTCCGTGACGGCCAACCAGCCGATCCAGACGTGAGGAAGTCTGTATTTGACTTGTTCTTGGGGAAGAAATTTGAGGGACCGGTGGAGAAGAGGCTGCGGGAGACTGGAGAGTGGTTAATTAACAATACCGAGCAAGATTTTCGTTCTTCTGGAAAAAGGATTCTGTTTTTTGTGTTGCAGTGGATACTGCCTATTTGGGCTTTGTCACTCCTAATAGCTTCCGGGGTAATCAAGTTACCATTCAACTCTCCTTTTCTGGATGACCTGATCATGTACGCTTCAGACTTGAGAAAAGCTTATGGTGCCCTCAAAGATACCACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGAGGTTGCCGTAGTTAAAGCCACGAACCACGTTGAATGCCCTCCTAAGGAGAGACACCTTAAAAAAATTCTATTTGGCACGTCTGCTATTCGACCCCGAGCTGATGTTGCTTATTGCATTCATGCACTTGCCCGTCGATTGGCCAAGTCACGAAATTGGACGGTGGCACTAAAAACACTGATAGTCATCCATAGGCTATTGAGGCCTGGGATTGCCCTGCTTGGGACGAGGGATCTGGAAAGTGAAGAACTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTTCTCTGTCGTCTTGTTGGCTACAAGCCAGCGTATGGAGCACCGGCTCCAAATCCATTTGAGGTTCAAGATCCATTTGCTTTCTCAAGCGGCATCCCTCCTCGTCCGGCTGTCCAAATGGCAGTGATGTCTCAACTGCAAACGAATCCATTTGGTCCGCTTCAACCTTTTCAGCCTCAGCCTCAGCAGCAGCTGTTGATGAGCGCCACAAATCCTTTTGGGGATGCTGAATTTGGGGCGTTTCCCGTGTTACTCACCCACAAAATAACAACAATCCATTTGGTAACCCAGGCTTACTAG 3477 0.4461 MIDICYGDRKQLKKCYDSTHHSCRLYPKSNTRPIVATRVSNGDDGAFDAAPQQSSPPPSGWVLLTVLCDMEEVKSTSSCLGDGYMAFFVRMLGLDHDPLDREQAIIALWKYSLSGKQCVDTLMRFPGCINLTVNLLRSDSSSSCEAAAGLLRSLSSVNLYRNLNIEEHVDVISIDQFFLQAKFLTYDPEGSKVIKKEAKNALLEFVKDEYHKILVVEEGLVPVPLIGAEAYKSLSPGLHSWPKLPDGTKIERASLKPSSYGASELLLGLHIDDKSANIEEAKLNAIVERTQQQFLARIGAIEWEGKSASDSESSDRQQLTLLPWLDGVARLVLILELEDKSAIKGAAESIADVSINEHMRIAFKEAGAVKHLVRLLNCDDDAVRLAVTHALERLSASNGVCQKIESEGALGPLINILKCSEISETIAEKSLRTIARILDPSKEMKLEFYDGPVNGSKKTFSGVRNDASSASFSTTEYPISKTTTRNDVLDSAFVARLVEILKSSSPSLQAKAASVLEFVSLTDPTVVSSISVDIESALDAVFQQKILRISGGEPDVEDQVSEAYPIEVEEAGLAVSAASWLMTRLLDSQHFREKVNSLHFIGLLRKILKSCIPLHSKDWVAACLVKLSSLSTDNPSLDPINEDESAVVELNRIISEEVENSARAIVAEGAIDPLVRLIEEGRERAVEAGLAILYNLSMDPENHSLIVAAGAVPVLRRIVLSHKGHSGKRHFIYSGICLLEMMGFIQAYKSSNDFLLFDNAKSREFHCRRRPAMFCLSNFSSITKTVAQANLPERDSSSQPVRSIDARPPLLSSKPKTITLPGKKRNRSPPRPTVVQIERIVGAGSFRDGQPADPDVRKSVFDLFLGKKFEGPVEKRLRETGEWLINNTEQDFRSSGKRILFFVLQWILPIWALSLLIASGVIKLPFNSPFLDDLIMYASDLRKAYGALKDTTKVGLAHVNSDYADLEVAVVKATNHVECPPKERHLKKILFGTSAIRPRADVAYCIHALARRLAKSRNWTVALKTLIVIHRLLRPGIALLGTRDLESEELLEQLPALQQLLCRLVGYKPAYGAPAPNPFEVQDPFAFSSGIPPRPAVQMAVMSQLQTNPFGPLQPFQPQPQQQLLMSATNPFGDAEFGAFPVLLTHKITTIHLVTQAY 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele56g0163 1158 MobiDBLite consensus disorder prediction 790 832 - -
Lele56g0163 1158 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 181 725 - -
Lele56g0163 1158 SMART arm_5 356 396 IPR000225 GO:0005515
Lele56g0163 1158 SMART arm_5 115 156 IPR000225 GO:0005515
Lele56g0163 1158 SMART arm_5 699 744 IPR000225 GO:0005515
Lele56g0163 1158 SMART arm_5 481 521 IPR000225 GO:0005515
Lele56g0163 1158 SMART arm_5 397 439 IPR000225 GO:0005515
Lele56g0163 1158 SMART arm_5 657 698 IPR000225 GO:0005515
Lele56g0163 1158 Gene3D - 939 1060 IPR008942 -
Lele56g0163 1158 SUPERFAMILY ARM repeat 82 719 IPR016024 -
Lele56g0163 1158 ProSiteProfiles ENTH domain profile. 958 1112 IPR013809 -
Lele56g0163 1158 Pfam ANTH domain 965 1036 IPR011417 GO:0005543
Lele56g0163 1158 SMART enth_2 964 1078 IPR013809 -
Lele56g0163 1158 SUPERFAMILY ENTH/VHS domain 965 1036 IPR008942 -
Lele56g0163 1158 CDD ANTH_N 966 1036 - -
Lele56g0163 1158 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 669 711 IPR000225 GO:0005515
Lele56g0163 1158 Gene3D - 61 227 IPR011989 -
Lele56g0163 1158 Gene3D - 288 731 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele56g0163 Lele-ChrLele56 1457182 1468842 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1288 54 18094087 18095303 Lele56g0163 56 1457182 1468842 hybridization