Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g1425 ATGGCGTTTAGGAGATCCCTTGCTCAACGCTTACTTGAATTTACCAAATTCTCTTCGCAAACTCATGCCAATGGCCGATTGTCTTCTTCCTCTGTTCATCCTCGAATACCTACGATCCCCAGCAAGCCTGACATTGCTCCGGATCCGGGAGATAAAGGCATCTTCCGTCGTTTATTGCACAAGCGGTCGATGTTTCGGCCGGAGCTCCGATCGCCATTGCTAGGAGATGGCGTTGTCGAGCAGCTCAAGGCTATTGGCATTCCTGGAAGTCGCATTCGATTGGAGGGTTTGGTTCCCCCGTCGGAGAATTCAAATATGGCGGTTGGCGATGCGAGGAAACTGCTGAAGGCAGCGCAGCTGGAGTTGGTGAAATCGAAGCTGCGGGAGATCCGAGAGAGCTGCATACCGTATTCGGAGTTTCTTCAGATCTGCGCCGAATACTCCTCGGATGAGGATCAAGCCAAACGAACGGCTAAGATGCTTGATGATTCTGCTGCTGTAATTGTATTGGGAGATGTCGTGTTTCTGAGGCCAGAAGAGGAAATTGAAAGTTTGTTGTTTCGCCAGTTCTAA 573 0.5026 MAFRRSLAQRLLEFTKFSSQTHANGRLSSSSVHPRIPTIPSKPDIAPDPGDKGIFRRLLHKRSMFRPELRSPLLGDGVVEQLKAIGIPGSRIRLEGLVPPSENSNMAVGDARKLLKAAQLELVKSKLREIRESCIPYSEFLQICAEYSSDEDQAKRTAKMLDDSAAVIVLGDVVFLRPEEEIESLLFRQF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g1425 190 MobiDBLite consensus disorder prediction 23 47 - -
Lele55g1425 190 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 43 184 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g1425 Lele-ChrLele55 20489347 20490152 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g1425 55 20489347 20490152 Lele55g1425 55 20489347 20490152 ECH
Lele55g1425 55 20489347 20490152 Lele56g1356 56 16726076 16728826 ECH
Lele53g0074 53 576133 577931 Lele55g1425 55 20489347 20490152 hybridization
Lele54g0077 54 632552 634436 Lele55g1425 55 20489347 20490152 hybridization