Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele55g0810 ATGAATGATCAGGAAGCTGCGGCGCCGGTGCCGAGGGTGGCCGTGGTGGTGTACCTGCTGAAGGGTAGATCTGTACTTTTAGGTCGGCGGCGCTCCTCCGTCGGCAACTCCACTTTCGCTCTTCCCGGCGGCAACCTTGAGTTTGGCGAGAGCTTCGAGGAATGTGCAATCAGAGAAGTGAAAGAGGAGACGGGGCTGGAGATTAGGAAAACGGAGTTCATAATGGTTACGAACAACGTGATGTTGGATGAACCAAAACGCTGTCACTACGTGACAATCTCAATGCGAGCTGAACCGGCGGATCCAGAGGAAGAACCTAAGAATATGGAACCAAACAAGTGTGATGGATGGGATTGGTATGAATGGGGAAATCTTCCAAAACCGCTGTTTGGGCCAATGGATAAATTGGTCAATGAAGGATTCAACCCATTTCCTATCTGA 441 0.5057 MNDQEAAAPVPRVAVVVYLLKGRSVLLGRRRSSVGNSTFALPGGNLEFGESFEECAIREVKEETGLEIRKTEFIMVTNNVMLDEPKRCHYVTISMRAEPADPEEEPKNMEPNKCDGWDWYEWGNLPKPLFGPMDKLVNEGFNPFPI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele55g0810 146 PANTHER 8-OXO-DGTP DIPHOSPHATES NUDT15 4 145 - -
Lele55g0810 146 FunFam Nucleotide triphosphate diphosphatase NUDT15 2 146 - -
Lele55g0810 146 Pfam NUDIX domain 12 133 IPR000086 -
Lele55g0810 146 ProSitePatterns Nudix box signature. 44 65 IPR020084 GO:0016787
Lele55g0810 146 ProSiteProfiles Nudix hydrolase domain profile. 10 143 IPR000086 -
Lele55g0810 146 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 3 145 - -
Lele55g0810 146 PRINTS NUDIX hydrolase family signature 53 68 IPR020476 -
Lele55g0810 146 PRINTS NUDIX hydrolase family signature 39 53 IPR020476 -
Lele55g0810 146 SUPERFAMILY Nudix 7 136 IPR015797 -
Lele55g0810 146 CDD Nudix_Hydrolase_19 25 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele55g0810 Lele-ChrLele55 5518448 5518975 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0676 53 16916369 16916900 Lele55g0810 55 5518448 5518975 hybridization