Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1360 ATGGTTCCCTCAATTCCCATTACAGGAATGCGCTGCAAAACTTCAGTAGTTATAGAAATCCTTGCTCATAGAGATTCAGCGCAAAGAGACCTCATTCTACAAGAATATGAAACTGCACATTCTGAACCGCTCACCAAACGTATCAGTTCAGAGCTTCATGGAAATATCAAGAAAGCGCTGCTTCTTTGGATGGATGAACCTGCCAATAGGGATGCCACCGTAGCAAGGCAAGCCTTGACTTCATCTCTTGTTGATAATCAAGCTATAACTGAAGTGATATGTTCTCGCTCCCCATCACAAATAAGGCGCTTTAAAGAAGTTTATCAGAAAGTGTACCATAAAAGTTTAGAGAGGGACATTGAGGACTACCTATCTGGGGATCTCAAGAAGCTGTTGCGTGAATATATAAGCGTGCCGCGTTATGAAGGCCCAGAATTTGATCAAGAGATAGTGGAGAAGGACGCTATGGATCTGTATAAAGCGGGGCAGGGGAAGGTGCTGGGCACTGATGAGAAGACTTTCATAAGGATTTTTAGTGACAGAAGCAGGACACATTTGGCTGCTATTGCCAAAGCATATGAAAGAAACAATGGCAAATCACTAGAAAAGGCTATAAAGAAAGAAGCACATGGCTTTTTTGAAAGGGGCCTCTTGGCCATTCTTCGATGTGCTACTAACCCTGCACTTTACTTCGCCAAGATTCTGAGGAAATCAATGAAGGGTTTTGGAACTGATGATAGTAGATTAATAAGAGTAATTGTGACAAGAACCGAAATTGATATGTGCCAAATAAAAGAAGCATACCTGCAAAGATATGGGAAACCATTAGCCAGTACTGTTCGATCAGACACATCAGGCCATTATAAGGACTTTCTTCTAGCTCTGACAGGTAGTGATGAGATGGGAACAAGTGCCCTATGA 921 0.4213 MVPSIPITGMRCKTSVVIEILAHRDSAQRDLILQEYETAHSEPLTKRISSELHGNIKKALLLWMDEPANRDATVARQALTSSLVDNQAITEVICSRSPSQIRRFKEVYQKVYHKSLERDIEDYLSGDLKKLLREYISVPRYEGPEFDQEIVEKDAMDLYKAGQGKVLGTDEKTFIRIFSDRSRTHLAAIAKAYERNNGKSLEKAIKKEAHGFFERGLLAILRCATNPALYFAKILRKSMKGFGTDDSRLIRVIVTRTEIDMCQIKEAYLQRYGKPLASTVRSDTSGHYKDFLLALTGSDEMGTSAL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1360 306 PRINTS Annexin family signature 48 64 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 PRINTS Annexin family signature 239 259 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 PRINTS Annexin family signature 283 296 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 PRINTS Annexin family signature 75 96 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 PRINTS Annexin family signature 159 185 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 PRINTS Annexin family signature 8 30 IPR001464 GO:0005509|GO:0005544
Lele54g1360 306 SMART annex3 168 220 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 SMART annex3 84 135 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 SMART annex3 11 63 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 SMART annex3 243 295 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 ProSitePatterns Annexin repeat signature. 243 295 IPR018252 GO:0005509|GO:0005544
Lele54g1360 306 FunFam Annexin 140 226 - -
Lele54g1360 306 ProSiteProfiles Annexin repeat profile. 149 222 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 FunFam Annexin 227 298 - -
Lele54g1360 306 SUPERFAMILY Annexin 7 299 IPR037104 GO:0005509|GO:0005544
Lele54g1360 306 Pfam Annexin 8 62 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 Pfam Annexin 70 132 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 Pfam Annexin 154 220 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 Pfam Annexin 230 295 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 Gene3D Annexin 66 136 IPR037104 GO:0005509|GO:0005544
Lele54g1360 306 ProSiteProfiles Annexin repeat profile. 226 297 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 ProSiteProfiles Annexin repeat profile. 66 137 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 Gene3D Annexin 6 65 IPR037104 GO:0005509|GO:0005544
Lele54g1360 306 ProSiteProfiles Annexin repeat profile. 1 65 IPR018502 GO:0005509|GO:0005544
Lele54g1360 306 PANTHER ANNEXIN 8 296 - -
Lele54g1360 306 Gene3D Annexin 227 298 IPR037104 GO:0005509|GO:0005544
Lele54g1360 306 Gene3D Annexin 140 226 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1360 Lele-ChrLele54 18571857 18573151 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1360 54 18571857 18573151 Lele56g0095 56 1028458 1030128 hybridization