Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1301 ATGGATCAAACTCAGAGATCACCAGCAGGAACAGCCTCACGGGCTTACCAGTTGCACCCGGCCCGAACCGCCATTCTCGATCTATTCAACCTTTACTTAGGAAGAAACAGCCGCCAGAAACCCGATGACATAATCCGAGAACCGCCGAACAAATCACAAAAGCGTGTGCTTGCTCTTAACAGAGAGCTTCCGCCACCAAATGAGCAATTCCTTCTAGATTTTGAGCAACTTCAGAGCCAGTTTCCTGACCAAGATCAGTTACGTTCTGTAACTGAAGCTATTATCATATCTCTGGTTGTGCAGTGCAGTAGTCATGCACCAAGAGCAGAATTTCTTCTATTTGCTTTAAGGAGCTTATGTGGTATTAGATACATTAACTGGGATACTTTTTTGCCATCTCTTCTCTCTTCCGTTTCTTCAGCAGATTTGCCTGCTGGCCAGGGTAGTCAAGCAGTGCCAGCTGCTTCCTCTTCAAGCTTATTGCAGTCGGGCATGTTACCACCTTCAAGCACAATAACCAATGTGTCTAATTTTCAGTCTTCAAATCCTGCATCTCCATTACCTTCAGTTCATCCCATTGGCTCCCCTCCTCCATCAACCATTGAACCATCAAGTTGTGCAGCTCTATCTCCGGTCAAATCTCCTGATATTTTATGTTCTGGACAACAATCTAAAACAAGAGGCATTCCATCTATCCGTAATAATGATATTAGTAGCCTTCGTCAGCTATGTTGCAAAATTATTTTGATTGGTCTTGAGTTTGATTTGAAACCAGTGACTCATGCTGAAATCTTCCATCACATGCTCAATTGGCTGGTAAATTGGGACCAAAGGCACCAGGGAGTTGATGAACCTGATATAGTAAAAGCATGGAAACCTGACAAAGCTTTAATTGCTTGGTTACACAGTTGTTTGGATGTGATCTGGCTTTTAGTTGATGAGGGAAAATGCCGAGTTCCCTTTTATGAATTACTTCGCAGTGGTTTGCAATTTATAGAGAACATACCTGATGATGAAGCCTTATTTACACTTATTTTGGAGATCCACAGGAGACGAGATATGATGGCTATGCACATGCAAATGCTAGACCAACATCTTCATTGCCCAACATTTGGCACTCCTCGAATTCTTACTCAAACTCCTAATATTTCAGGCGAAGCAGGCATGAGACTTGCGCCAATCACATATTTAAGCGTACTTGGGGAACCGTTACATGGAGAGGATCTTGCAACTGCTATCCAGAAGGGAAGTTTGGACTGGGAGAGAGCTCTACGTTGTATAAGGCACGCTCTTCGTACTACCCCATCTCCTGATTGGTGGAGACGTGTGCTGCTAGTGGTTCCTTCCTTTAGGCCTTCCTCTCAAGGGCCTACTCCTGGTGCTGTTTTTTCTTCAGAAATGATCTGTGAGGCAACAATTGATAGAATTGTTGAACTGTTGAAATTGACAAATTCAGAGGTAAATTGCTGGCAGGACTGGCTTGTCTTCTCCGATGTTTTCTATTTTTTTATGAAAAGTGGGTGCATTGATTTTGTTGAGTTTGTGGACAAGCTGGTGTCACGCCTTGCAGAGGATGACAACCTTCTAAAGACAAACCATGTGACTTGGCTTCTTGCACAAATAATTCGAGTTGAACTGGTCATGAATGCTTTGAATTTAGATTCTAGAAAGGTGGAGACTACCAGAAAGATTCTTTCATTTCATAGAGAAGAGCAGAACTCTGATCCCAATAACCCACAAAGTATATTGCTTGATTTTGTTAGCAGCTGCCAAAATTTACGTATTTGGTCTTTGAATACAGCAGCCAGAGACTATCTGAACAATGAGCAACTTCAAAAAGGAAAGCAAATAGATGGATGGTGGAAACAAGCAAGCAAAGGGGATCGCATGATGGATTATATGAATATGGATGAACGCTCAATAGGGATGTTTTGGGTTGTGTCTTACACAATGGCACAACCTGCTATTGATACAGTAATGCATTGGTTAACTCCTGCTGGAGTTGTTGAGATGATTACGGGACCAAATCTACAATCACCAGAGAGATTAGCGGCCACACGGGAAGTGAGCCCACTGCCTGTATCATTGTTGTCTGGTTTTGCAATGAACTCATGCATGAAGCTATCTTGTCAAATGGAAGAAAATATTTTTTCTGGGCAGGTTGTACCCAGCATTGCAATGGTTGAAACGTATACTAGATTGTTGCTCATTGCACCTCATTCACTATTTCGCTCACATTTCAATCATTTAGTGCAAAGAAATCCTTCTTTATTGAGCAAACCTGGAGTGACACTTTTGGTACTTGAGATATTGAACTATCGATTGCTTCCACTTTACAGGTATCAAGGAAAAAGCAAGGCCTTGATGTATGATGTTACAAAGATTATTTCTGCCCTAAAAGGGAAACGAGGAGATCATCGAGTATTCAGATTAGCTGAAAATCTGTGCCTGAATCTTATTTTCTCATTGAGAGATTTTTTCTTGGTTAAAAGGGAAGGAAAGGGTCCCACTGAGTTTACTGAAACTCTGAATCGTGTAACTGTAATAACACTTGCTATCCTTATTAAAACAAGAGGGATTGCTGATGCTGAGCACATGCTTTATCTCCCAACTATGTTGGAACAAATAATGGCAACTAGCCAGCATACATGGTCTGAAAAAACTCTCCGTTACTTCCCTTCTGTTCTGCGTGATGCCCTGGGTGGTCGAATGGATAAAAGGAGTCTTTTGATACAAGCATGGCAGCAGGTAGAAGGCACTGTTTTAAACCAGTGCACACAGCTGCTTACAGCATCAGCTGATCCTAATTATATTGTGACCTATGTTGGTCACAGTTTCCCTCAGCATCGACAATATTTGTGTGCTGGTGCATGGACATTAATGCATGGTCATGGAGAAAACATTAATGGTGGAAGCCTGGCACGTGTCCTTAGGGAAATTTCTCCTGAAGAGGTGACGTCTAATATTTACACAATGGTGGATGTTCTGCTTCATCATATTCAAATGGAAATTCAACAAGGGCATTCCGTACAGGACCTTCTGTTAAAAGCTTGTGCAAATCTTGGCTTTTTCGTTTGGATAAATGAGCTGCTTCCCTTAGATATCTTGCTTCTGGCACTTATTGATCGTGATGATGATCCTCATGCTTTACGAATTGTGATCAGTCTTCTTGATAGGCAAGAGCTTCAGCAAAGAGTAAAACAATTTATCGGGACTCGTGGACCCCCTGAGCATTGGCTTTACACTGGACAATTCAAGCGGGTTGAACTGCAAAAGGCTCTCGGAAATCACCTTTCATGGAAAGACAAGCACCCAGTGTTCTTTGATGATATTGCAGCCCGTTTGCTTCCAGTCATCCCTTTAATTATTTATAGACTTATTGAAAATGACGCAATGGATCTAGCAGACAGAGTATTGGCCATGTATACTCCATTGCTTGCTTACTACCCTCTAAGATTTACATTTGTTCGTGATATACTTGCCTATTTCTATGGCCATCTTCCTGGAAAGCTCATTGTTCGAATACTCAATATACTTGATATAAGCAAGATTCCTTTGTCAGAGTCATTCCCACAGCAAATAACCTCTTCCAATCCTGTCATGTGCCCTCCTATGGACTATTTTGCAACTCTCTTGTTGGGTATAGTGAATAACGTTATCCCTCCATTGCATAACAATTCAAAGTCTGGATCAACCGGTGATGCTTCGAACAATGCACTACGCTCTCTACATAACAAGCCTCCAGCAGTATCTCAGACTGGGGCTGCAAATGCTTTGGAGGGCCCAAAAGCTTTCTACCAAATTCAGGATCCTGGCACATATACTCAGCTGGTTCTTGCAACTGCTGTTATTGAAATCCTCTCCCTCCCTGTCCCTGCATCTCAGATAGTACAATCACTCATTCAAATTATTGTAAATATACAACCAACATTGATCCAGTCCAGTAATGGTCTCCATGGTGGTTCGAACGGTGTAGGGCAAGGTTCGGTATTGCCAACATCTCCTTCAGGGGGAAGTACAGATTCCTTAGGCGCAAGCAGATCAACTCCTTCAGTTTCTGGAATAAATACCTCCAACTTTGCCTCACGAAGTGGTTATTCATGCCAACAACTATCTTGCTTGTTCATTCAAGCTTGTGGTCTCCTTCTGGCTCAGCTTCCTCCTGAATTTCACTTACAACTTTACATGGAGACAACGCGTATAATAAAAGAGAACTGCTGGCTTACAGATGGGAAAAGGTCACTTGGGGAAGTAAACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACTTGGGCTGCACAGGACAATACCTCTACAGCCATTGGGAATGTAGTTGCCCTACTTCACTCTTTCTTTAGTAACCTCCCTCAGGAATGGCTAGAAGGGACACATGTTATCATCAAGCAACTTCGGCCTGTAACATCCGTCGCAATGTTGAGGATAGCATTCCGTATAATGGGTCCACTTCTTCCAAAACTTGCCAATGCTCATGCGCTTTTCAGCAAGACCCTTTCGTTATTGTTAACTGTACTAGTGGATGTATTTGGAAAAAACTCCCAGCCGCCCGCTGCCGTTGAAGCATCAGAAATAACAGATATCATTGACTTTCTGCATCATGTCATCCATTATGAAGGGCAAGGAGGGCCCGTGCAGGCTAGCAGCAAACCTCGACCCGATGTTTTGGCTCTCATAGGAAGGGCAGCGGAGAGTCTACGTCCAGACGTTCAGCATCTGCTTTCGCACCTGAAACCTGATGTAGATTCTTCTAGTTATTTTGCACCCGTTCCAAAGGTCCAGAATCCAACCTAG 4809 0.4273 MDQTQRSPAGTASRAYQLHPARTAILDLFNLYLGRNSRQKPDDIIREPPNKSQKRVLALNRELPPPNEQFLLDFEQLQSQFPDQDQLRSVTEAIIISLVVQCSSHAPRAEFLLFALRSLCGIRYINWDTFLPSLLSSVSSADLPAGQGSQAVPAASSSSLLQSGMLPPSSTITNVSNFQSSNPASPLPSVHPIGSPPPSTIEPSSCAALSPVKSPDILCSGQQSKTRGIPSIRNNDISSLRQLCCKIILIGLEFDLKPVTHAEIFHHMLNWLVNWDQRHQGVDEPDIVKAWKPDKALIAWLHSCLDVIWLLVDEGKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTPRILTQTPNISGEAGMRLAPITYLSVLGEPLHGEDLATAIQKGSLDWERALRCIRHALRTTPSPDWWRRVLLVVPSFRPSSQGPTPGAVFSSEMICEATIDRIVELLKLTNSEVNCWQDWLVFSDVFYFFMKSGCIDFVEFVDKLVSRLAEDDNLLKTNHVTWLLAQIIRVELVMNALNLDSRKVETTRKILSFHREEQNSDPNNPQSILLDFVSSCQNLRIWSLNTAARDYLNNEQLQKGKQIDGWWKQASKGDRMMDYMNMDERSIGMFWVVSYTMAQPAIDTVMHWLTPAGVVEMITGPNLQSPERLAATREVSPLPVSLLSGFAMNSCMKLSCQMEENIFSGQVVPSIAMVETYTRLLLIAPHSLFRSHFNHLVQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTEFTETLNRVTVITLAILIKTRGIADAEHMLYLPTMLEQIMATSQHTWSEKTLRYFPSVLRDALGGRMDKRSLLIQAWQQVEGTVLNQCTQLLTASADPNYIVTYVGHSFPQHRQYLCAGAWTLMHGHGENINGGSLARVLREISPEEVTSNIYTMVDVLLHHIQMEIQQGHSVQDLLLKACANLGFFVWINELLPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKQFIGTRGPPEHWLYTGQFKRVELQKALGNHLSWKDKHPVFFDDIAARLLPVIPLIIYRLIENDAMDLADRVLAMYTPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNILDISKIPLSESFPQQITSSNPVMCPPMDYFATLLLGIVNNVIPPLHNNSKSGSTGDASNNALRSLHNKPPAVSQTGAANALEGPKAFYQIQDPGTYTQLVLATAVIEILSLPVPASQIVQSLIQIIVNIQPTLIQSSNGLHGGSNGVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYSCQQLSCLFIQACGLLLAQLPPEFHLQLYMETTRIIKENCWLTDGKRSLGEVNSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTHVIIKQLRPVTSVAMLRIAFRIMGPLLPKLANAHALFSKTLSLLLTVLVDVFGKNSQPPAAVEASEITDIIDFLHHVIHYEGQGGPVQASSKPRPDVLALIGRAAESLRPDVQHLLSHLKPDVDSSSYFAPVPKVQNPT 1602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1301 1602 MobiDBLite consensus disorder prediction 1227 1254 - -
Lele54g1301 1602 MobiDBLite consensus disorder prediction 175 208 - -
Lele54g1301 1602 MobiDBLite consensus disorder prediction 1323 1351 - -
Lele54g1301 1602 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 39 1599 IPR021629 -
Lele54g1301 1602 MobiDBLite consensus disorder prediction 1227 1252 - -
Lele54g1301 1602 Pfam Mediator complex subunit 23 488 1213 IPR021629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1301 Lele-ChrLele54 18166568 18177571 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1301 54 18166568 18177571 Lele55g0152 55 970945 972338 hybridization
Lele54g1301 54 18166568 18177571 Lele56g0150 56 1377845 1388914 hybridization