Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1213 ATGGGAGACGAAGGATCCCCGGAGCATCAACGATCGGCATCTGCTCCGTTGATATTTTTGATCGCTGTCGGTTTTCAGCTCGCATCTAGGTGGCTCGATCAGTTGAAGAAGAAGGGATCCAAGAATGGGAAAGAGGCTCGGTTGCGTAGAGAAATAAAGGAGCTCTATGTGGAGGCGAGCTCCTTGTCACAGCCATCAACATTTGCGCAAGCTGCAAAGCTTAAAAGAGTAGCAGCTGCCAAGGAGAAGGAACTTGCAAACTATCAAGACATGCAGAGCAAGGAGAACGATTCATACTCGAGAGTTCTGCTCATTTCAAAGGTTTTAACATATCTAGTGCTGCTTATCTGGTTTTGGAGGGTTCCTGTGGCTACTATATCACATCAACTTGTGCAACCTTTCGGGAAATTATTATCCTGGAAAGCGGGAGGGGTTCAAAACAACAAAATCATGGTTGGGATAATACCTTGGTTAATAGTATCTACTAGGGTTAGCAAATTCATTTGCCGCCTCATCGATGCCAACTAG 528 0.4545 MGDEGSPEHQRSASAPLIFLIAVGFQLASRWLDQLKKKGSKNGKEARLRREIKELYVEASSLSQPSTFAQAAKLKRVAAAKEKELANYQDMQSKENDSYSRVLLISKVLTYLVLLIWFWRVPVATISHQLVQPFGKLLSWKAGGVQNNKIMVGIIPWLIVSTRVSKFICRLIDAN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1213 175 Pfam CHD5-like protein 36 160 IPR028945 GO:0071816
Lele54g1213 175 Coils Coil 71 91 - -
Lele54g1213 175 PANTHER TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB 27 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1213 Lele-ChrLele54 17670946 17674254 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g1213 54 17670946 17674254 Lele54g1213 54 17670946 17674254 ECH
Lele54g1213 54 17670946 17674254 Lele55g0245 55 1496941 1499968 hybridization
Lele54g1213 54 17670946 17674254 Lele56g0232 56 1869529 1872854 hybridization