Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0036 ATGTTCAGATCAGCAAGCACCAAGAAGGGACCTGGCAAGTATGAGAAATTAGGGAAAGAAGCTTCTGGAAGTGAGGATCAGGATCCAATGAAGGAAGAGCTCAAAATAACCAAAAGCTTGGCATCAACAATAGAAATAGGTTCAGGCAGTACTCTGCAGAGGAATCCGACGAAGAAGAGTCATCCAATATTCAGCTTCATGGATTTCCGAGGGAAGAAGAAAACGACGGCGAGGCCGGAGATGGTAAGATATATTGAGTATCTCAAGGAAGGAGGCGTGTGGGATTCTGATTCTAATAAGCCTGTCATTTATTACAAGTCCACTAAGTCAGACACGTCGTTTAGGAAGATCACATTATCTTCTGAGCTTCGGACAAAATTAGCAGAGGGAAGGAGCCAGCCAACTTCAACTGTGGACTGTGGAGCTCCGGTAATGGAGCTAGTAGCTTCACACCTATCTCCAACTCTACCCAGAAAGAAATATCCTTCTCACACTCTATTTCATGGGCTTATCTCCAGAACAATATGTCATCAAATCCCACTTGAATTTATTACTTTTATAAATAGGAATGGTCGTTTTGAAGCATGTGCCCGTAAAAAAGAGAGGTTCAGCGAACTAGAGTATAGCAGAGAAGTCGAAGGAGCAGAGGAACTACATACGACCTCTTCTTTGGACGATGACTTGTCTTTTTTGTCTCTCAGCGAGAAACCTGACAGGAATTTGGCTATGTGGGACGATTATGAAGCGGAGGAACTTGACTATGATTCCCACCCTGACCATCGAAGCGGATATGTGGCCTTACTTGGGAAGCCAAATGTCGGGAAGAGTACACTAGCAAACCAAATGATTGGTCAAAAGTTGTCTATAGTTACACAGAAACCTCAAACAACAAGGCACCGTATTCTTGCAGTGGACTGTGCAGTGATAAATGTTCTGATATCAGTGTTTCCCTTCAAAAAGCTGTGCTATAATATAATACTTTATGATACACCTGGTGTTCTCAAGAAGGAAATGCACTTGTTGGACTCAATGATGATGAAGAATGTTCGCAGTGCTGCAGTTAATGCTGATTGTGTATTAATTCTTGTTGATGCGTGTAAAATTCCTGAAAATATTGATGAAGTGTTGAAGGAAGGTGTAGGAGATCTCAAGGATAAAGCCCCCAATCTACTGATTCTTAATAAGAAGGATCTTATCAAACCTGGGGAAATTGCAAAGAAACTTGAGTGGTATCAGAAATATACTGATGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGTCATGGCGTTGAAGATGTCAAGGACTGGATACTGTCAAAGCTTCCCAATGGACCAGCATACTATCCAAAGGCATTAAAAGCATTTAATTCTAGAACTAAAACAAAGTCAGCTGAAGCAAAAACTTGCATTGCCTTAGGGAACTTCTGTCCACCAATACACAGTAACAGTCACACAAGTTTTCCTAGACGAAACCAAAACAATGCAAAAATTCATGAAACTCCATCAGCACAGGAAAACTATAGTGACATTGTCAGTGAGCACCCAGAAAGATTGTTTGTGGGTGAAATCATTCGAGAAAAGATCTTTATGCAGTACAGAAATGAAATACCCTATGCTTGCCAGGTGAATGTTGTAAGCTACAAGGCTCGGGCTAATGCAAAAGATTTCATACAAGTGGAGATTGTTGTTGAAAAGTATTCACAGAAGATTATACTTATTGGAAAAGAGGGAAAGGCTTTGAAACTTCTTGCAACAGCTGCCCGTCTGGACACTGAAGACTTTCTGCAGAAGAAAGTTTATCTTGAGGCGCTTGCTTATATCATTTATGCAGCAGACACACACACATGCTGA 1854 0.4099 MFRSASTKKGPGKYEKLGKEASGSEDQDPMKEELKITKSLASTIEIGSGSTLQRNPTKKSHPIFSFMDFRGKKKTTARPEMVRYIEYLKEGGVWDSDSNKPVIYYKSTKSDTSFRKITLSSELRTKLAEGRSQPTSTVDCGAPVMELVASHLSPTLPRKKYPSHTLFHGLISRTICHQIPLEFITFINRNGRFEACARKKERFSELEYSREVEGAEELHTTSSLDDDLSFLSLSEKPDRNLAMWDDYEAEELDYDSHPDHRSGYVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILAVDCAVINVLISVFPFKKLCYNIILYDTPGVLKKEMHLLDSMMMKNVRSAAVNADCVLILVDACKIPENIDEVLKEGVGDLKDKAPNLLILNKKDLIKPGEIAKKLEWYQKYTDVDEVIPVSAKYGHGVEDVKDWILSKLPNGPAYYPKALKAFNSRTKTKSAEAKTCIALGNFCPPIHSNSHTSFPRRNQNNAKIHETPSAQENYSDIVSEHPERLFVGEIIREKIFMQYRNEIPYACQVNVVSYKARANAKDFIQVEIVVEKYSQKIILIGKEGKALKLLATAARLDTEDFLQKKVYLEALAYIIYAADTHTC 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0036 617 Hamap GTPase Era [era]. 260 617 IPR005662 GO:0003723|GO:0005525
Lele54g0036 617 Pfam 50S ribosome-binding GTPase 265 395 IPR006073 GO:0005525
Lele54g0036 617 PANTHER GTPASE ERA 204 453 IPR005662 GO:0003723|GO:0005525
Lele54g0036 617 TIGRFAM small_GTP: small GTP-binding protein domain 265 437 IPR005225 GO:0005525
Lele54g0036 617 MobiDBLite consensus disorder prediction 1 32 - -
Lele54g0036 617 Gene3D - 257 452 IPR027417 -
Lele54g0036 617 MobiDBLite consensus disorder prediction 9 32 - -
Lele54g0036 617 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 261 444 IPR030388 GO:0005525
Lele54g0036 617 Gene3D - 513 607 IPR015946 -
Lele54g0036 617 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 510 605 IPR009019 GO:0003723
Lele54g0036 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 265 530 IPR027417 -
Lele54g0036 617 CDD Era 260 442 IPR030388 GO:0005525
Lele54g0036 617 Pfam KH domain 536 603 IPR004044 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0036 Lele-ChrLele54 354085 366620 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0036 54 354085 366620 Lele54g0036 54 354085 366620 ECH
Lele54g0036 54 354085 366620 Lele56g1391 56 16989908 16990365 hybridization