Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1352 ATGGAAGAAGGGCAAGGATTTGCACTGACCCAGATGAGGAAGGCAGTTGAGAAGCTTGGTTCTTCTGCTGAGATGTATGGGGATTCTACAGTTATGAGGTTCTTGGTTGCTCGATCAATGGAACCGGACAAAGCAGCTAAGATGTTTGTTCAGTGGCAGAAGTGGAGGACTAAGATGGTTCCCCATGGATTCATTTCAGAATCTGAAGTTCCAGATGAATTGGAAGGGAGAAAAGTCTTTTTGCAGGGTTTGTGCAAGGACAAATACCCCGTCCTGATCATCCAAGCAAGGAAGCATTTTCCTCCCAAGGATCAGAATCAATTCAAGAAATTTGTTGTTCATTTGCTAGACAAGACAATTGCAAGTGCTGTCAAAGGAAGTGAAACAGGAAATGAGAAGTTGATTGGGATCCTTGATCTGCAGCATATCACATATAAAAACATTGATGCTCGTGGGTTAATCACAGGATTTCAATTTTTACAGGCATACTATCCTGAACGTCTAGCAAAGTGCTATCTGGTACACATGCCGCAGTTTTTTGTGGCGGTCTGGAGACTAGTTTCTCGTTTTCTAGAGAAAGCTACCCTAGAAAAGATTGTGATAGTGAGCAGTGAAGAGGAGAGGGGAGAGTTTGTGAGAGAGGTAGGAGAAGAGATTCTGCCAGAAGGGTATGGTGGACGAGCAAAGCTTGTACCTATTCAAGAAGTTGCTTTGCACAATGGCAATGCTGCCACCAATTCTAATCCATCCAACTAA 756 0.4339 MEEGQGFALTQMRKAVEKLGSSAEMYGDSTVMRFLVARSMEPDKAAKMFVQWQKWRTKMVPHGFISESEVPDELEGRKVFLQGLCKDKYPVLIIQARKHFPPKDQNQFKKFVVHLLDKTIASAVKGSETGNEKLIGILDLQHITYKNIDARGLITGFQFLQAYYPERLAKCYLVHMPQFFVAVWRLVSRFLEKATLEKIVIVSSEEERGEFVREVGEEILPEGYGGRAKLVPIQEVALHNGNAATNSNPSN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1352 251 CDD SEC14 71 226 IPR001251 -
Lele53g1352 251 SUPERFAMILY CRAL/TRIO N-terminal domain 5 64 IPR036273 -
Lele53g1352 251 SMART sec14_4 72 229 IPR001251 -
Lele53g1352 251 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Lele53g1352 251 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Lele53g1352 251 PANTHER OS03G0850700 PROTEIN 6 235 - -
Lele53g1352 251 Gene3D - 1 243 IPR036865 -
Lele53g1352 251 Pfam CRAL/TRIO domain 75 226 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1352 Lele-ChrLele53 21719158 21723618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1352 26 222 Acyl Lipid Metabolism Gene Families AT1G55840 24.299 2.61e-09 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1352 53 21719158 21723618 Lele55g0125 55 812459 817386 hybridization