Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1347 ATGGCGGATATTTCCGGCGACGGGGGAGGGGTGGCGCCGGATGAGGTGAGGGCGGAGGCTGGGGTTGCGACACCGACACCTTCTCAGCCTTTGGCGGTGACGGTGTCGGGATCCTTCAAGGAAGGGAAGAGTTCATCACGGAGGCGGGCCTCGGTGAGGCCGAGCTTGGATGCGGACGAGTTCCTGAACCTGTTGCACGGGTCGGATCCGGTGAAAGTCGAGCTCAATCGCCTGGAGAATGAAGTCAGAGATAAGGATAGGGAATTATCAGAAGCACAGGCGGAGATCAAAGCCTTGAGGTTTTCTGAACGGCAAAGGGAAAAGGCCGTTGAAGAGCTTACTGAAGAGCTTTCAAGGGTTGAGGAGAAGCTGAAGTTAACAGAATCTCTACTGGAAAGCAAGAATCTAGAAATAAAGAAAATCAATGATGAGAAAAAAGCATCCATGGCAGCTCAGTTTGCAGCTGAAGCCACTCTTCGGAGGGTTCATGCTGCTCAGAAGGATGATGACATGCCTCCAATAGAAGCCATCCTGGCTCCTTTGGAGGCTGAACTTAAGCTTGCTCGGCAAGAGATTGCTAAACTTCAAGAAGATAACAAGGCTTTAGATCGTCTTACAAAATCTAAAGAAGCTGCATTACTTGAAGCAGAGAGGACTGTTCAGGTTGCATTGGCCAAGGCCTCTATGGTGGATGACCTTCAAAATAAAAATCAAGAACTTGTTAAACAAATTGAAATTTGCCAGGAAGAAAATAAAATTCTGGACAAGATGCATAGACAGAAGGTGGCGGAGGTTGAAAAGCTTACTCAAGCTGTTAGGGAGCTTGAAGAGGCTGTCCTTGCAGGTGGTGCAGCTGCTAATGCTGTGAGGGACTATCAACGAAAAGTTCAAGAAATGAATGAGGAAAGGAAAACTCTTGACCGGGAGTTGGCCCGTGCCAAGGTAACAGCAAACAGAGTTGCTACGGTTGTAGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCTGTCAAACAGTGGCTTGAAGAGCGACGATTCTTGCAGGGAGAGATGCAGCAACTTCGTGAGAAGCTTGCTATAGTTGAGCGTGCTGCCAAGTCTGAAGCACAATTGAAAGAAAAGTATCATTTACGGCTTAAAGTGATGGAGGAGACTTTGAGAGGAACTTCTAACAGTGGTAATCGCGGTACCTCAGAGGGAAGAAGTGCTAGCAATGGGCCTTCTCGACGTCAATCCCTAGGTGGAGCTGATAACATGTCAAAACTACCATCTAATGGGTTTTTGTCCAAGAGATCACCATCCTTTCAAATGAGATCTTCTCTATCCTCTAGCACAGTGCTAAAGCATGCTAAAGGCACATCTAAATCTTTTGATGGTGGCACAAGGTCACTGGAAAGGAGCAAGGTTTTGGCGAATGGGACTCCTCCTAGTTATCTGTTCAATCAGTCTTGTGAAGGAACCAAAGACGTTCAGGAAAACAGCAGCTGGAAAGGGAGTTTGGATGATAAGCCTAATGAGTTCCCCATGGGAGAGACGGAGGATAGTGTTCCTGGTGTTTTATACGACATGCTGCAGAAAGAGGTCTTAGCCTTGAGGAAAGCTGGTCTTGAGAAAGATCAAAACCTAAAAGATAAAGATGATGCCATTGAGATGTTAGCAAAGAAAGTAGATACATTGACCAAAGCCATGGAAGTTGAGGCCAAAAAGATGAGAAGAGAAGTAGCAGTCATGGAGAAGGAGGTAGCAGCCATGCGTGTGGGAAAAGAACAAGAGAACAGAGCAAAGAGGTTCGGTAATGCAAAGGGCCCTGTAAATAATGCTCAGCAGCAGTTGATTTCTGGAAGAGCTGCAACAAGAGGAGGATTAACGCGCAGCACGCAATGA 1887 0.4674 MADISGDGGGVAPDEVRAEAGVATPTPSQPLAVTVSGSFKEGKSSSRRRASVRPSLDADEFLNLLHGSDPVKVELNRLENEVRDKDRELSEAQAEIKALRFSERQREKAVEELTEELSRVEEKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQEDNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELVKQIEICQEENKILDKMHRQKVAEVEKLTQAVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVATVVANEWKDANDKVMPVKQWLEERRFLQGEMQQLREKLAIVERAAKSEAQLKEKYHLRLKVMEETLRGTSNSGNRGTSEGRSASNGPSRRQSLGGADNMSKLPSNGFLSKRSPSFQMRSSLSSSTVLKHAKGTSKSFDGGTRSLERSKVLANGTPPSYLFNQSCEGTKDVQENSSWKGSLDDKPNEFPMGETEDSVPGVLYDMLQKEVLALRKAGLEKDQNLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAVMEKEVAAMRVGKEQENRAKRFGNAKGPVNNAQQQLISGRAATRGGLTRSTQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1347 628 Coils Coil 561 581 - -
Lele53g1347 628 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 54 607 IPR009768 GO:0007010|GO:0008017
Lele53g1347 628 Pfam Microtubule-associated protein 70 59 609 IPR009768 GO:0007010|GO:0008017
Lele53g1347 628 Coils Coil 75 144 - -
Lele53g1347 628 Coils Coil 178 215 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 386 461 - -
Lele53g1347 628 Coils Coil 289 316 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 591 628 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 385 515 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 468 501 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 603 628 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 1 53 - -
Lele53g1347 628 Coils Coil 230 278 - -
Lele53g1347 628 Coils Coil 338 372 - -
Lele53g1347 628 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1347 Lele-ChrLele53 21684423 21689284 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1347 53 21684423 21689284 Lele55g0131 55 842813 847696 hybridization
Lele53g1347 53 21684423 21689284 Lele56g0131 56 1266111 1271106 hybridization