Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0980 ATGTATCACACTCACCAACCTAATCTTCCTTGTCTCCATTGTCACCCTGAGAGATTTATCAGAATGGTTCAGAATCTCATAGAGAGATGCTTGATCCTTCACATGAGCCAAGACCAATGCGTTAAGGCACTAGAAGAGCATGCTAGGATTACCCCACTTGTTACACTTACAGTGTGGAAAGAGCTACAAAAGGAGAATAAGGATTTCTTTAGAGCATATTTCCAAGTTATCTCTCCAAGGCCTTTTACAAGTAACACACCTGAATCTTTTCATATCCTTTTTGCCTGTGAAGCTTTGAAAAGGATCTGA 309 0.4013 MYHTHQPNLPCLHCHPERFIRMVQNLIERCLILHMSQDQCVKALEEHARITPLVTLTVWKELQKENKDFFRAYFQVISPRPFTSNTPESFHILFACEALKRI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0980 102 Pfam Plant protein 1589 of unknown function (A_thal_3526) 23 73 IPR006476 -
Lele53g0980 102 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 20 74 IPR006476 -
Lele53g0980 102 PANTHER OS02G0137100 PROTEIN 14 75 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0980 Lele-ChrLele53 19303919 19304414 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0980 53 19303919 19304414 Lele49g1019 49 6535945 6540660 CCT
Lele53g0980 53 19303919 19304414 Lele50g1114 50 7314969 7318962 CCT
Lele53g0980 53 19303919 19304414 Lele51g1039 51 6654162 6658478 CCT
Lele53g0980 53 19303919 19304414 Lele52g1076 52 7230061 7234040 CCT