Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0679 ATGGCCGATAACACAGAAGATATAGCCGAGGAAATCTCGTTTCAGAGCTTTGACGATGATTGTAGACTGCTCGGCAATATGCTCAACGACGTCTTGCAGCGAGAAGTTGGGAGTACGTTCATGGAGAAACTGGAAAAAATCCGAGTTCTTGCTCAGAGTGCCTGTAATATGAGGCAGGCAGGGATTGAGGACATGGCCGAGCTGGTCGAGAAGCAGTTGGCTTCAGAACTATCGGAGATGACTTTAGAAGAAGCTCTGACTCTTGCTCGTGCCTTCAGTCATTATCTTACTTTGACGGGCATAGCTGAAACCCATCACAGGGTTAGAAAAGGACGGAATGTGGCATATTTATCAAAATCTTGTGATGACACCTTTAACCAGCTGCTGCAGAGTGGAGTTTCCCCAGCAGAGCTTTATAGCACTGTCTGCAAGCAGGAGGTTGAAATTGTTCTTACGGCCCATCCCACACAAATCAATCGCCGTACTTTACAATACAAACACATTAGAATTGCTCATCTTTTGGATCTTAATGATCGACCTGATCTTAGTTTTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGTGAAAAACCCACACCAGTTGATGAGGCTAGGGCTGGTTTGAATATTGTGGAGCAGTCACTATGGAAAGCAATCCCTCATTATTTACGTCGAGTCAGCAATGCTTTAAAGAAGCATACAGGAAAACCACTTCCATTAACTTGTACTCCTATAAAGTTTGGATCTTGGATGGGGGGTGATAGAGATGGAAACCCAAACGTGACAGCAAAGGTCACCAAAGACGTTACGCTTTTATCAAAATGGATGGTGATTGACCTCTATTTTCGTGAAGTTGATAACCTTAGATTTGAGCTGTCTATGAATCGTTGCAGTGAGAATTTGTTAAGGCTGGCACATAAAATTCTGGATGAAGAAGCTCTCTCTGAGGATGACCATGAGAATTGGAATCAATCTATGAATAGAAGTCAATTCAAACATCATGGTCAACAAGCTCCATTTCCAACACAACTTCCAGCTAAAGCTCATTTACCCTCTTGTGCTGAAAATGGTGAATCTCAGTATCCAAGATTGGATATTCCGGGAAAAGATTACGTGCCACTGAATCATGAGGATGGTGATATTTCTTCTAGTTCAACATCCAACAGTGACAATCATAACAGTCATGCATCACCAACAAGTTCAGACAATCTGAGCGCTTCTCAAGTGCCTGCAAATCTACGCTCTAGTCAACCACATACTCCGAGGAAATTTTATACTGATTCCCAAACGGGAAGGTCCAGTTTTCAGAAGCTTTTGGAGCCCAAGCTCCCTCAGCTTCCTGGAATTGCTCCTTACAGGGTTGTCCTTGGGAATGTAAAAGATAAGCTTCTAAAAAGTCGTAGACGGTTGGAGCTTCTTCTTGAGGATAATCCATGTGATTATGATCCTTCAAGTTATTATGAAACAACTGACCAGCTTTTGGAGCCTTTGCTTCTCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGTTAGCTGATGGTCGACTTGCTGACCTGATCCGTAGAGTTGCTTCCTTTGGAATGGTGTTGATGAAGCTTGACTTGCGTCAGGAATCTGGTAGACACGCTGAGACACTTGATGCAATTACGAAATATTTGGATATGGGAACTTATAGTGAATGGGATGAAGAAAAGAAATTGGACTTCTTAACTCGAGAACTGAAAGGGAAGAGGCCACTGGTTCCTCCCAGTATAGAAGTTCATCCTGATGTTAGTGAAGTCTTGGATACCTTCAGAATTGCAGCTGAGCTAGGGAGTGATTCACTTGGAGCCTATGTGATTTCAATGGCTTCAAATGCGAGTGATGTTCTTGCAGTGGAGCTTTTACAGAAAGATGCACGGCTTACTGTTAATGGGGAGTTGGGACGAGCATGTCCTGGTGGAACAGTGCGGGTTGTTCCTCTATTTGAAACTGTGAAGGATCTGAGAGGGGCTGGTTCAACTATTCGAAAACTTTTATCGATTGATTGGTATCGTGAACACATCATTAAGAACCATAATGGTCATCAAGAGGTTATGGTTGGGTACTCTGATTCTGGTAAAGATGCTGGGCGATTCACCGCTGCTTGGGAACTTTACAAAGCTCAGGAAGATGTCACAGCTGCTTGCAATGAGTATGGCATTAAAGTTACTCTGTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGAGGCCCCACACATATGGCTATTCAGTCACAGCCACCTGGCTCTGTGATGGGGACGCTTCGTTCTACCGAGCAGGGAGAGATGGTACAGAATAAGTTTGGATTGCCACAGATAGCTGTGAGACAGCTTGAGATATACACAACAGCTGTGCTACTTGCAACTCTTCGTCCGCCTCTGCCTCCCCGAGAAGAAAAATGGCGTAATGTCATGGAAGATATCTCGAAAATTAGCTGCCAATATTACCGAAGCGTAGTATATGAGAATCCAGAATTCCTTGCCTACTTCCATGAAGCCACACCTGAAGCAGAGCTTGGCTTCCTTAACATTGGAAGCCGCCCCACGAGAAGAAAGAGCACGAAAGGAATTGGACATCTTCGTGCCATACCATGGGTTTTCGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGTGCTTGTGAAGAAGGATATACCGAAGAGCTACAAGCCATGTACAAAGAATGGCCTTTCTTTCAATGTACATTAGACCTTATAGAGATGGTTCTGGGGAAAGCAGACATTCCTATAGCCAAGCACTACGATGAAGTCCTCGTGTCAGAAAAGAGGCAAGAGCTCGGCCACGAATTAAGGGAGGAGCTGAAAACAACAGAGAAGTTTGTTCTGGTTGTTAGTGGACATGAGAAACTTCAGGAGAACAATAGGAGCTTAAGGAGGCTAATTGAGAATAGACTTCCGTTTCTAAACCCCATGAACATGTTGCAGGTGGAGATACTAAAGAGGCTTAGACGTGATGATGACAACCTTAAAATCAGAGATGCTTTGCTAATCACCATAAATGGGATTGCTGCTGGGATGAGGAATACGGGTTAA 3150 0.4406 MADNTEDIAEEISFQSFDDDCRLLGNMLNDVLQREVGSTFMEKLEKIRVLAQSACNMRQAGIEDMAELVEKQLASELSEMTLEEALTLARAFSHYLTLTGIAETHHRVRKGRNVAYLSKSCDDTFNQLLQSGVSPAELYSTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDLNDRPDLSFEDREMVIEDLVREITSIWQTDELRREKPTPVDEARAGLNIVEQSLWKAIPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVTLLSKWMVIDLYFREVDNLRFELSMNRCSENLLRLAHKILDEEALSEDDHENWNQSMNRSQFKHHGQQAPFPTQLPAKAHLPSCAENGESQYPRLDIPGKDYVPLNHEDGDISSSSTSNSDNHNSHASPTSSDNLSASQVPANLRSSQPHTPRKFYTDSQTGRSSFQKLLEPKLPQLPGIAPYRVVLGNVKDKLLKSRRRLELLLEDNPCDYDPSSYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVASFGMVLMKLDLRQESGRHAETLDAITKYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVHPDVSEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLTVNGELGRACPGGTVRVVPLFETVKDLRGAGSTIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVTAACNEYGIKVTLFHGRGGSIGRGGGPTHMAIQSQPPGSVMGTLRSTEQGEMVQNKFGLPQIAVRQLEIYTTAVLLATLRPPLPPREEKWRNVMEDISKISCQYYRSVVYENPEFLAYFHEATPEAELGFLNIGSRPTRRKSTKGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEEGYTEELQAMYKEWPFFQCTLDLIEMVLGKADIPIAKHYDEVLVSEKRQELGHELREELKTTEKFVLVVSGHEKLQENNRSLRRLIENRLPFLNPMNMLQVEILKRLRRDDDNLKIRDALLITINGIAAGMRNTG 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0679 1049 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1049 IPR022805 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 Gene3D Phosphoenolpyruvate/pyruvate domain 405 543 - -
Lele53g0679 1049 Gene3D Phosphoenolpyruvate/pyruvate domain 289 354 - -
Lele53g0679 1049 MobiDBLite consensus disorder prediction 366 445 - -
Lele53g0679 1049 MobiDBLite consensus disorder prediction 392 445 - -
Lele53g0679 1049 Pfam Phosphoenolpyruvate carboxylase 462 1049 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 Pfam Phosphoenolpyruvate carboxylase 19 339 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Lele53g0679 1049 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1049 IPR021135 GO:0006099|GO:0008964|GO:0015977
Lele53g0679 1049 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1049 IPR015813 GO:0003824
Lele53g0679 1049 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 707 719 IPR033129 -
Lele53g0679 1049 FunFam Phosphoenolpyruvate carboxylase 1 416 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0679 Lele-ChrLele53 16927076 16934584 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0679 53 16927076 16934584 Lele55g0807 55 5498907 5506772 hybridization
Lele53g0679 53 16927076 16934584 Lele56g0750 56 5674383 5682871 hybridization