Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0658 ATGTCTGTCACCCCCTTCGTCTTCGTCTTCTTCTTCTTCTTCACCGCCTCCAATGCTTCTCATCAACCCTACCCTTATGGTTTAGCTTACCACATCGACTGTGGTAGTGCCACTAATACTACCGACCAATTTAACACCACTTGGCTCTCCGACCGATTCTACACCGGAGGCGCCACCTCCATAGTCTCTGAGCCACTTCGATTCCACTACCCCTACGAGAAGACTCTTCGCTTCTTCCCTGTCTCCTACGGCAAGAAGAATTGCTATGTAATCCCCTCGCTCCCCAACGGCCGCTACTTCTTCCGCACATTTATCGTTTATGACAATTACGATGGCAAGTCTCACCCCCCGTCTTTCGACATCTCCGTCGAGGGCACCGTCGTGTTCAGCTGGCGTTCACCCTGGCAGGAATCGTTAGCTCGTGATGGCGCCTACTCCGATCTCTTTGCGTACGTTAACGACGGTGAAGCTGACGTCTGCTTTTACAGCTTAGCGACTGATCCTCCGGTCATTTCCTCCCTTGAGCTCGTGCAAGTCGATTCGTTATCCTATGATTCGGCCACTGCTGGAAATGACACCGTTCTCGTCAATTATGGACGATTATCTTGCGGGAGCGGTTCATGGGGTCCTGGATTTAGCGACGACAAGGACCTGTTCGGTCGGTCATGGCAATCCGATAAAGAATTCCGATCAAATTCGGGCGATTTCAGTACCATATCGACGAGGAATACTATAAGTGGGACTGATGTGAAGCCCAATTACTTTCCTATGAAATTGTACCAGTCGGCGGTGACGGTGGATGGAGATAGAGCATTGGAGTACAAATTGAATGTGGACGCAAAATTGGATTACCTGGTGTGGTTGCATTTTGCGGAAATTGATTCGAGCGTGAAGAAGGCAGGGGATCGGGTTTTTGATGTGATCGTCAATGACAATAATGTGACTAGGATTGACATATTCAAGCAGGTCGGAAGTTTTGCTGCATATAGTTGGCATTACACAGTGAAGAATTTAAGCAGTAGTGTCTTGAGTGTGAAGCTTGTAGCGGCTAAAGGTGCCCCACTCATTAGCGGACTTGAAAATTATGCCCTGGTACCTAACGATCCTTCCACCCTCCCAGAACAAGTAATTGCTATGGAAGCTTTGAAAGAGTCGCTTCGCATTCCGGATAGAATGGGTTGGAATGGCGACCCTTGTGCTCCAACTAATTGGGATGCTTGGGAGGGAGTAACATGCCGTATGAACGAGAATAAAACTGCTCTTGTGATTAGTCAAATAGATCTAGGAAGTCAAGGCTTAAAAGGGTACATAAGGGAGCAGATTGGTCTTTTGTCAAACTTGGTAAGCCTGAACCTGAGTTCTAATTCTTTGGAGGGTGAAATTCCTTCTGGGCTTGGTCAAAAATCTCTAACAAATCTGGATTTATCCAACAATCAGTTTACTGGCTCCATACCAGATAGCTTAGCATCTTCAAGTTTGCAGCTCGTGCTATTAAATGGTAACTTATTGGAAGGACGAGTCCCAGAGCAACTCTATTCAGTTGGTGTGCATGGTGGAGCTATCGATCTTTATGGCAACAAAGGTTTGTGCGGTGTGCCTTCTTTGCCAGCATGTCCAATATTTTGGGAGAATGGCCGACTATCCTCTCGGGGTAAAATTGCCATAGGCTTGTCATGTCTTTTTGTTGTGTGTCTGATAGTGCTGCTGGTATATATCTACATCAGGAAGAGAAGAAATGATTATGACTTTGGTCTACCTCATGAATTGATGTCTTTAGCTGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTGATGGTCCTTGAGATGGAGAGCCAACATGCCAAGGGATTACATACATATTCTTCACAATAA 1875 0.464 MSVTPFVFVFFFFFTASNASHQPYPYGLAYHIDCGSATNTTDQFNTTWLSDRFYTGGATSIVSEPLRFHYPYEKTLRFFPVSYGKKNCYVIPSLPNGRYFFRTFIVYDNYDGKSHPPSFDISVEGTVVFSWRSPWQESLARDGAYSDLFAYVNDGEADVCFYSLATDPPVISSLELVQVDSLSYDSATAGNDTVLVNYGRLSCGSGSWGPGFSDDKDLFGRSWQSDKEFRSNSGDFSTISTRNTISGTDVKPNYFPMKLYQSAVTVDGDRALEYKLNVDAKLDYLVWLHFAEIDSSVKKAGDRVFDVIVNDNNVTRIDIFKQVGSFAAYSWHYTVKNLSSSVLSVKLVAAKGAPLISGLENYALVPNDPSTLPEQVIAMEALKESLRIPDRMGWNGDPCAPTNWDAWEGVTCRMNENKTALVISQIDLGSQGLKGYIREQIGLLSNLVSLNLSSNSLEGEIPSGLGQKSLTNLDLSNNQFTGSIPDSLASSSLQLVLLNGNLLEGRVPEQLYSVGVHGGAIDLYGNKGLCGVPSLPACPIFWENGRLSSRGKIAIGLSCLFVVCLIVLLVYIYIRKRRNDYDFGLPHELMSLAAKRNRYQRQKSLMVLEMESQHAKGLHTYSSQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0658 624 ProSiteProfiles Leucine-rich repeat profile. 469 491 IPR001611 GO:0005515
Lele53g0658 624 SUPERFAMILY L domain-like 373 512 - -
Lele53g0658 624 Gene3D Ribonuclease Inhibitor 375 539 IPR032675 -
Lele53g0658 624 Gene3D - 199 363 - -
Lele53g0658 624 Gene3D - 27 180 - -
Lele53g0658 624 FunFam Di-glucose binding protein with Leucine-rich repeat domain 200 362 - -
Lele53g0658 624 FunFam Putative LRR receptor-like serine/threonine-protein kinase 373 539 - -
Lele53g0658 624 Pfam Malectin-like domain 32 363 IPR024788 -
Lele53g0658 624 PANTHER OS07G0107800 PROTEIN-RELATED 31 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0658 Lele-ChrLele53 16745971 16752501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0658 32 515 Receptor kinase-like Gene Family AT5G59670 27.680 2.22e-35 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0658 53 16745971 16752501 Lele55g0831 55 5700551 5707095 hybridization
Lele53g0658 53 16745971 16752501 Lele56g0773 56 5875500 5881773 hybridization