Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0033 ATGGCAGCCGGTGATGAGAAACATTCTAGAATATGGCGTTATACTTGGGAAGCACAGTCCCACATCCCTACGCTTCGTCTCTTGCTTTTCGCCAAAAATGCGAATCCTTTTGTGCAATGCCTCAATCTGAAGGTTCAACTTCTTCCTTCTCGGTCTGTGGTGGCTTTGAGCTGGCTTGAGCCCGCCCTAGTCTCACTTAGGGTTCCGATTCCTAGGGTTTTGGTTGACTTTGAATCACCTGTCAGTTTTCGAGCTTTGGACGATCACATTGAAGTGAAGCTCCTACTCCTTCTGCCGGTCGATCATCCCATTGTTTCGAGCTTTGATTCTGTAATGAATTTATCTGATGACCCAGTAAATGCATTGCCTGATGTATCAAAGCCTCTAGTAATGGAATCTGATGTAACAAATTTATCTTCCAGAGCAGAACTTCATTTTTACTGCAGAAATTGCTCGTTCAAATTGACTAGAAATCCTCTCAGGAGTTTCGTTGAAATGCCATCAGTCAATTGGCGAGAGGTGGCTGACAACTGGTTTGGGGCTTGTTGTTGTTCATTTGGAGGCATAAGCGAGAAGCTGGTTATCAAATATGCAAATTCTTATACTTGTGCACCAGGGGTGTGCCTTTTAAGCTCTACATCTATTACTCTTTGCAAGGATGATCTTACAGAATATAACTTCCCCGAATGTGCTGGAGAAGAATGTAATTCTAAATCAGATAAATTTGAAGGAGGAGTTAACAAAGCTGCAATAAATTCTGAGATATCTATGGAAAGATCTTCAACTTGCAGTGAGATTGGTAAAACCATATTTAATTCTGACAAGAGTTCAAGGTTTGCAGATTCTGAGAATGAAAACCTTCATGTGAACTTGGGACATGAAGTTGGTAAAAACAAATCTAATCATGATGACTTCTGCCGTTCATACCCAAATTCAAATGTCCCTGCAGATGTGGCCATGGCTTCCAGTTGTTGTGCTCATATGAGAAGCAGTATTCACATTCTTGATAATGAGGACTGGCAACACCGATGCTGTGAAAATGCTAGAAAAGAACATAGAGATACAACAGATATAGAAATTTTTGCAAGTCAGAAATCTTTCCTCAACGGGTTTCTTGAAGATGTTTTCATGGCTAGATCTTCCAATCTTTCAGAAGATATTGATTGGTGTGAATTCACGTGTCCTCAGTGCAAGTCTGTTCTTGGAGCCTATCCACGTTGTAAGGGCGATGCACCTGTAGATGGAGGAGTACGATTGTTCAAATGTAATATTTCAACTTGTTTGCCAGCTAGAGGGTCTGGAGACTTGTTCAGGCATTATACGATGGAAAAAATGTTTGCAAATAAGCTAATAGAGTGTGCACATGATGAATCATCATTTCGGTTTGTGGTCATAGATCTGAAAGCAAAATCCCCTGCCCTGCAAATCATTCTTATAAATCCAGATACACGGTCAATTTCTGGTGATTGTTTTATCACTGAGGACTCTGAAGTTCCCAAATTACAACTACAGCCCGGCATTAAGGTGCTTTTTTCTGAATGCAGTACTGCTACAGAATTTCAGTTAAGGATGGCCGAGGAATGGATAACAAATAACTCAGCGGAAAGTATTTTCATGCTGACTTGTCAAATAAAAGAATTGGCGGCGTCATTGATGTCAGCAAGGGAGGTATATCCACCTTCATATACGTCCCTTCAGGGATTATGTTTGTCGTCAATGCAACGGTAG 1728 0.4097 MAAGDEKHSRIWRYTWEAQSHIPTLRLLLFAKNANPFVQCLNLKVQLLPSRSVVALSWLEPALVSLRVPIPRVLVDFESPVSFRALDDHIEVKLLLLLPVDHPIVSSFDSVMNLSDDPVNALPDVSKPLVMESDVTNLSSRAELHFYCRNCSFKLTRNPLRSFVEMPSVNWREVADNWFGACCCSFGGISEKLVIKYANSYTCAPGVCLLSSTSITLCKDDLTEYNFPECAGEECNSKSDKFEGGVNKAAINSEISMERSSTCSEIGKTIFNSDKSSRFADSENENLHVNLGHEVGKNKSNHDDFCRSYPNSNVPADVAMASSCCAHMRSSIHILDNEDWQHRCCENARKEHRDTTDIEIFASQKSFLNGFLEDVFMARSSNLSEDIDWCEFTCPQCKSVLGAYPRCKGDAPVDGGVRLFKCNISTCLPARGSGDLFRHYTMEKMFANKLIECAHDESSFRFVVIDLKAKSPALQIILINPDTRSISGDCFITEDSEVPKLQLQPGIKVLFSECSTATEFQLRMAEEWITNNSAESIFMLTCQIKELAASLMSAREVYPPSYTSLQGLCLSSMQR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0033 575 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 136 565 IPR019193 -
Lele53g0033 575 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 3 574 IPR019193 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0033 Lele-ChrLele53 279429 283086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0033 53 279429 283086 Lele53g0033 53 279429 283086 ECH
Lele53g0033 53 279429 283086 Lele55g1464 55 20799435 20803083 hybridization
Lele53g0033 53 279429 283086 Lele56g1400 56 17068489 17073093 hybridization