Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0016 ATGGACACCCTGTCAAAGTTAAAAAACGGAATTGGGCTCCGTATTGTTTGTTTTCCGGATCCTCGTTTGCGGTGGTGTTCTGCAACGCCAATCTGTTTCTTCTTTCTCTGTTGGGTGCGTTCTGGTGGTTTGGGAGTGAGCCGAGCATCCTCCTCCCCTATTCTGGTCTGTCGCTGCTGGGCCGTAATCACCGAGAATCTAATGGCCGCGGCCACGGCTTGCAAGCGGATGGGACAATTAGGAGCAAATTCAGGGATGAGCTTGATCGGCTTAGGAGGCTTTGGGGCTTCCAAAGCACAGTCTACATTGGATAGAGTATCTTCAGCTATTTTGCCTCTGACTAAACCAATTTACTGTAGACACATTTCTCAACTGGCTAATTCTAATGGAAAGAGATTGTTTCTTGTTGACACATTAGCCCTTGTTAGAAGACTAGAAGGGCAAGGTGTGCCCTCAAAGCAGGCGGAGGCTATAACTGCTGCCATAACTGAAGTTTTAAATGACACCATGGAAAATTCATCTCAGTCATTTGTTTCAAAAGGAGAAATACAGAAAATCGAAATGATTCAAGAAGCCAGCGTTTCAAAATTCAAATCAGAAGTGCAGAGTTCACAGGGCCATCATTTTTCCATGTTGCAACACGAAACTGAGAAACTTCGGAATGATATAGAGAAGATGCGTAGTGAATTAAGATATGAGATAGATAAAGTCACTGCAGGGCAACGGCTGGATTTGAACCTTGAAAGGGGGAGAATAAGGGATGAATTAAACAATCAGAGTGCCGAAACTACAAATCTGACTAACAAACTTGATAGAGAAATTCATTCTTTAAAAGCACAGCTGGAAGCAGCAAAATATGAAGTTATAAAATACTGCATAGGGACGCTTGTTTCAATCTCTGCAGTTGGCCTCGCTGTTGTTCGCATTTTGATGTAA 936 0.4316 MDTLSKLKNGIGLRIVCFPDPRLRWCSATPICFFFLCWVRSGGLGVSRASSSPILVCRCWAVITENLMAAATACKRMGQLGANSGMSLIGLGGFGASKAQSTLDRVSSAILPLTKPIYCRHISQLANSNGKRLFLVDTLALVRRLEGQGVPSKQAEAITAAITEVLNDTMENSSQSFVSKGEIQKIEMIQEASVSKFKSEVQSSQGHHFSMLQHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELNNQSAETTNLTNKLDREIHSLKAQLEAAKYEVIKYCIGTLVSISAVGLAVVRILM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0016 311 Gene3D - 137 237 - -
Lele53g0016 311 Pfam Coiled-coil domain-containing protein 90-like 136 310 IPR024461 -
Lele53g0016 311 FunFam Coiled-coil domain-containing protein 90-like 137 237 - -
Lele53g0016 311 Coils Coil 253 287 - -
Lele53g0016 311 PANTHER UNCHARACTERIZED 117 311 IPR024461 -
Lele53g0016 311 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0016 Lele-ChrLele53 172693 179020 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0016 53 172693 179020 Lele53g0016 53 172693 179020 ECH
Lele53g0016 53 172693 179020 Lele55g1478 55 20905075 20908577 hybridization
Lele53g0016 53 172693 179020 Lele56g1411 56 17159960 17164258 hybridization