Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1548 ATGAAAGCCTTTGTTTCATCGTCATCATCATCTAATGGGGTTTCTGCAATTTTGTTCTATTTACTCGTATTGCTATCGGTGAGCTCGATTTCGGCTTTTTCTTCAACTGGGTCGATCAGGCATCCCGTCAAGTTTATCTTAGGAGCAGAGAATTTGGGTCCATGGAAGAATGCAATCACACAAGCGGCTCTAGCACCAGTGCCAGAATCACATTCCCCTGAGGATACTCTTATTTTGGCGGCAAACAGGACCAAAAGGCCTGACATTCTTCGAGGTTTCCGACGTTATCGCGATGGTTGGGACATTGCTAATAAGCATTATTGGGCATCAGTTGGGTTCACTGGTGCTGCTGCTTTCATTCTTTCTGTCCTATGGTTTCTTTCATTTGGCTTGGCTCTTATAATTCATTTATGCTGTGGATGGGGAATTAACATCAAGGATGAAGGATCAAATCATTCGCAGAGAATTTGTCTCATACTGCTTATATTATTCACCTGCGCTGCAGCGACCGGGTGTGTCGTCCTATCTGTTGGGCAGGATAAGTTCCATGATGAAGCCTTGCAAACCCTAGGCTATGTCGTCAATCAATCCGACTATACGGTGCAAACTCTGAGAAATGTCACAGAGTATCTCTCCCTTGCAAAGACTATAAATGTGGCTCAGATGCTTCTCCCATCTGATATCATGGATGATATTGACAATTTGAATATGGATCTAAATGCTGCAGCAAATACATTGTCTGAGAAGACAAATGAAAATTCTGTCAAAATCAAAAGAGTATTCAGTGCCGTGCGCTCAGCTTTGATCGCAGTGGCAGCAGTGATGCTTCTCTTAGCTCTAATTGGCCTGTGTTTGTCTATTCTTGGACATCAACATGCAGTTCTCATATTTGTTATCAGTGGATGGTTATTAGTTGCAGTCACATTCATTCTTTGTGGAGTGTTCCTCATATTTAACAATGCAATTTCTGATACATGCATGGCTATGGGAGAATGGGTGGAGAATCCTCATGCAGAATCTGCCCTGAGCAACATCCTTCCGTGTGTTGATCAGAGAACAACAAACAAGACACTGGTTCAGAGTAAACAAGTGGTCACCAATATTGTAAGTGTTGTGAATACGTTCATCTACAGCATTGCCGATGCAAATGCATGGCCGAATGATCCGAACTATTACAATCAATCTGGACCGGCGATGCCGCCTTTGTGCTACCCTTTTGATTCTCAGCTCAAAGAGCGCCAATGTACATCTCAAGAAGTTTCCTCCTCCAATGCCTCATTGGTTTGGAAGAAGTATGAGTGCCAGGTAACAGAATCTGGTTTTTGCAGCAGCGCCGGTAGGGTGACGCCAGAGATTTACTCACAGTTGGTGGGTGCAGTTAACGAGAGCTATGCATTAGAACATTATACACCACTTTTACTCAACCTTCAAAATTGCAATTTTGTGAGGGAAACATTCCAAGAAATCACTTCAAGTTACTGTCCTCCTTTAAACCATTTTCTTAAGGTTATCAATGCAGGGCTTGGTCTCATTTCAGTTGGTGTCTTGCTCTGTCTTGTTCTCTGGATTCTCTATGCAAACCGCCCCCAAAGGGAGGAGGAGTTTGCCAAACCATCCTTTGCACAAAAACTAAAGAATAGATTTGGTAAGAACCGCAACAACAATACAAATTCATCATTGCCCAATGCAGCAACGGAGGTCTAG 1704 0.4308 MKAFVSSSSSSNGVSAILFYLLVLLSVSSISAFSSTGSIRHPVKFILGAENLGPWKNAITQAALAPVPESHSPEDTLILAANRTKRPDILRGFRRYRDGWDIANKHYWASVGFTGAAAFILSVLWFLSFGLALIIHLCCGWGINIKDEGSNHSQRICLILLILFTCAAATGCVVLSVGQDKFHDEALQTLGYVVNQSDYTVQTLRNVTEYLSLAKTINVAQMLLPSDIMDDIDNLNMDLNAAANTLSEKTNENSVKIKRVFSAVRSALIAVAAVMLLLALIGLCLSILGHQHAVLIFVISGWLLVAVTFILCGVFLIFNNAISDTCMAMGEWVENPHAESALSNILPCVDQRTTNKTLVQSKQVVTNIVSVVNTFIYSIADANAWPNDPNYYNQSGPAMPPLCYPFDSQLKERQCTSQEVSSSNASLVWKKYECQVTESGFCSSAGRVTPEIYSQLVGAVNESYALEHYTPLLLNLQNCNFVRETFQEITSSYCPPLNHFLKVINAGLGLISVGVLLCLVLWILYANRPQREEEFAKPSFAQKLKNRFGKNRNNNTNSSLPNAATEV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1548 567 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 67 551 IPR040283 -
Lele52g1548 567 Coils Coil 232 252 - -
Lele52g1548 567 MobiDBLite consensus disorder prediction 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1548 Lele-ChrLele52 19425763 19429688 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1548 52 19425763 19429688 Lele52g1548 52 19425763 19429688 ECH
Lele49g1236 49 8284145 8288597 Lele52g1548 52 19425763 19429688 hybridization
Lele50g1595 50 21053786 21058060 Lele52g1548 52 19425763 19429688 hybridization