Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1499 ATGGCGGTTGATGCTTTCTCCGACAGACCCACCAGCACCGGAATCAGCACTCGGATCTCCTTCTCCGGTGATCTGAACGACACCGACGATGAAGATCTCAGTGTACGCAGATCAGACTCCAGCTCCGACTTCGTTTTCTGCGTCGCCGGCGGCTTCTCTCACCAAATCTCTTCTGCCGACGAGCTTTTCTCCAATGGCAAGATCCTGCCCATGCAACTTCTTCACAGGGTTACTCATTCCCCAAATAGAACACTTCAATCTCTCCAATCATCTCGTTTCCGTTCTCAATCTCAGCCTTCTTCTTCGAAGAAGATGCTCAAAGAGTTCTTATGTGAAGATATCGAAGAAGAAGACGACGATGAAGAACAGGAAGAAGAAGAGGAAGATAGGTTTTCGTTTAAATCTTTATGGCAATTCAGGCGAAGTAGCAGTTTGAATTGCGATGCCACAACGCGTGGGAAAAGCTTAATTCAATCGCGACAGTTTCTGTCACGAAGTAATTCGACTGGTTCGGCATTAAATCCGAAACAATCAGAGATTCCGAAGGCAGAAAGGGAGAAGCAGAGGTTGCAGAAGCAATCCTCTGTTTCGAGCAGAAGATCGTCATCGTCTTCATCGTCTTCAAGCTCAAGTACATATTATTTCTATAGCTCGTCGCAGAAACATGTTTTACAGAAAAATCGTGGATCTTCAGGTAATGGAGTTCGAATCAGTCCTGTTTTGAATCTTCCACAAGCATATATTCCTAAAGGTTCCATGAGTTTCTTCGGATTTGACTCTCTGTTCTGCAATGGAAAGGTTAATAGGAAGAAGAAGAAATAG 822 0.4465 MAVDAFSDRPTSTGISTRISFSGDLNDTDDEDLSVRRSDSSSDFVFCVAGGFSHQISSADELFSNGKILPMQLLHRVTHSPNRTLQSLQSSRFRSQSQPSSSKKMLKEFLCEDIEEEDDDEEQEEEEEDRFSFKSLWQFRRSSSLNCDATTRGKSLIQSRQFLSRSNSTGSALNPKQSEIPKAEREKQRLQKQSSVSSRRSSSSSSSSSSSTYYFYSSSQKHVLQKNRGSSGNGVRISPVLNLPQAYIPKGSMSFFGFDSLFCNGKVNRKKKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1499 273 Coils Coil 173 193 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 179 193 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 158 176 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 1 34 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 194 211 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 82 105 - -
Lele52g1499 273 PANTHER BNAANNG22500D PROTEIN 16 272 - -
Lele52g1499 273 Coils Coil 107 127 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 158 211 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 82 104 - -
Lele52g1499 273 MobiDBLite consensus disorder prediction 9 23 - -
Lele52g1499 273 Pfam Protein of unknown function (DUF1645) 59 211 IPR012442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1499 Lele-ChrLele52 18988932 18989753 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1499 52 18988932 18989753 Lele52g1499 52 18988932 18989753 ECH
Lele49g1289 49 8712135 8712959 Lele52g1499 52 18988932 18989753 hybridization
Lele50g1540 50 20612853 20613674 Lele52g1499 52 18988932 18989753 hybridization