Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1472 ATGGCTTCTCTCACTCGTTTATTTTCTCTCTTCCTCTCTTTCTTCCTTCTTGTTTCTCTCACATGTGGAGTAGGAGCAGCTAGTTCTTCTCCCAAGGGCGCCAAAATAGGCCAAGGCTATCGCTTAATCTCCATTGAAGAGACTCCTGATGGTGGTCTCGTAGGTCACCTTCAGCTGAAGAAGAAGAACAGCATCTACGGTCCTGATATCCCCCTCTTGCAACTCTATGTCAAGCATGAGACGGAGAATCGTTTGAGGGTACACATAACCGACGCGGAGAAGCAGAGATGGGAAGTACCGTACAATCTGTTGCCGAGGGAGCAACCTCCAGCTCTGAAGCAGACGATTGGAAGGACAAGGAAGAATCCTATAACAGTTTCAGAGTACTCAGGTTCTGAGCTTATTTTCAGCTACACTGCAGATCCATTCAGCTTCGCGGTGAAGAGGAAGTCGAATGGACAGCTTCTTTTCGATTCGAGCTCCGATGAATCAGACGCATATGGTCCAATGGTGTTCAAGGATCAGTACCTTGAGATTTCGACCAAATTGCCCAAAGATGCGTCGTTGTATGGCTTGGGGGAGAACACTCAGCCACACGGGATCAAACTTTACCCGAACGATCCATACACTTTGTACACAACTGATATTTCTGCCATTAATCTCAATGCTGATCTGTATGGGTCTCACCCTGTGTATATGGATCTTAGAAATGTCGGTGGTGAGCCTTCTGCACATGCTGTTTTGTTGCTGAATAGCAATGGGATGGATGTGTTTTACAGGGGAACTTCTCTGACGTACAAGATTATTGGAGGTGTTTTCGATTTTTACTTCTTTGCAGGGCCTACTCCTCTGAATGTTGTTGATCAGTACACTTCCTTAATTGGCAGACCAGCACCAATGCCTTACTGGTCATTTGGATTCCACCAATGCAGATGGGGTTACCATAACCTATCCGTTATAGAAGATGTTGTTGATAGTTACAAGAAGGCTCAAATCCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGGGAAAAAGGACTTCACAGTTAACCCAACCAACTACCCTCGTCCAAAGCTTTTGGCCTTCCTAGACAAAATCCACCGCCTCGGTATGCATTACATTGTCATCATTGATCCGGGGATTGCTGTCAATGCCAGTTATGGAGTCTACCAGAGGGGCATGGCTAATGATGTCTTTATCAAGTATGACGGCGAACCCTTCATGGCCCAAGTCTGGCCAGGAGCAGTTTATTTCCCTGATTTTCTTAATCCCAAAACAGTTTCTTGGTGGGGCGATGAGATCCGCCGATTCCATGAACTACTTCCCGTCGATGGCCTGTGGATTGACATGAATGAAGTTTCAAACTTCTGTTCAGGAAAGTGCACAATTCCCAAGGGCAAGCAGTGCCCCACTGGAACCGGACCCGGATGGATCTGTTGCCTAGATTGCAAAAACATTACCAAGACAAGATGGGATGACCCACCCTACAAGATAAATGCTTCAGGAATACAAGCTCCCATAGGCTACAAAACCATAGCCACTAGTGCAGTTCACTACAATGGTGTTTTGGACTATGATGCTCACAGTCTTTATGGTTTCTCCCAATCAGTTGCAACCCACAAGGGGCTTCAAGGGCTTCAGGGAAAACGACCTTTTATCCTGTCCCGGTCCACTTATGTCGGTTCGGGCAAATATGCTGCTCATTGGACAGGTGACAACAAGGGCACATGGGAGGACTTGAGGTACTCCATATCTACAATGCTCAATTTTGGCATTTTTGGAGTTCCAATGGTTGGTTCAGATATTTGCGGCTTCTACCCAGCGCCAACCGAAGAGCTTTGCAACCGGTGGATCGAAGTAGGCGCTTTCTACCCATTCTCAAGGGATCATGCAAACTACTACTCCCCAAGACAAGAGCTTTACCAATGGGAATCAGTCGCCGAGTCTGCTCGCAACGCCTTGGGCATGAGATATAAGCTCCTTCCTTACCTTTACACTTTGAACTATGAGGCTCATATTAGTGGAGCCCCAATAGCCAGGCCACTGTTCTTCTCATTCCCAAGCTACACTGCATGTTATGGCACCAGCACCCAGTTCTTGCTAGGCAAAGGTCTTTTGATCTCTCCGGTGCTGGAGCAGGGGAAAACACAAGTGAATGCCCTATTCCCTCCTGGCACCTGGTACAGTATGTCTGACCCGACATCATTCGTTACATCGAAGAACGGAGTCAATGTCAACCTCGATGCACCGCTGCATGTGGTCAATGTTCATTTGTATCAGAACATCATTCTCCCTATGCAACGGGGAGGATTGCTTTCCAAGGAAGCCCGAATGACACCATTCACACTCGTGATAACCTTCCCTGCCGGCGCCACTGAAGGAGAAGCTCAAGGGAACCTGTACCTCGACGACGACGAGCTGCCAGAAATGAAACTGGGAAATGGCTATTCAACTTACGTTGATTTCTATGCAAGTTTGAAACAGGGAAGTGTCAAGATTTGGTCACAAGTCCAAGAAGGCAAGTTTGCTTTGGACAAAGGCTGGATTATCGAGAAGGTATCTATATTGGGATTGGAAGGAAGTGCTTCACCATCGTCCCTTGAACTTGATGGTATACCTCTGGTGGGCGGAGAGGTTCGTACATCGCAACTGAAGTATTCGCCGGCGGGGCAAGAAGATTATGAACAGACGACAATGACGGTGGACGTGAATGGCTTGAAAATCCCTGTTGGTAAAAATTTTGCAATGACCTGGAAAATGGGGGTTTCTCATTGA 2784 0.4705 MASLTRLFSLFLSFFLLVSLTCGVGAASSSPKGAKIGQGYRLISIEETPDGGLVGHLQLKKKNSIYGPDIPLLQLYVKHETENRLRVHITDAEKQRWEVPYNLLPREQPPALKQTIGRTRKNPITVSEYSGSELIFSYTADPFSFAVKRKSNGQLLFDSSSDESDAYGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDLRNVGGEPSAHAVLLLNSNGMDVFYRGTSLTYKIIGGVFDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWSFGFHQCRWGYHNLSVIEDVVDSYKKAQIPLDVIWNDDDHMDGKKDFTVNPTNYPRPKLLAFLDKIHRLGMHYIVIIDPGIAVNASYGVYQRGMANDVFIKYDGEPFMAQVWPGAVYFPDFLNPKTVSWWGDEIRRFHELLPVDGLWIDMNEVSNFCSGKCTIPKGKQCPTGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSAVHYNGVLDYDAHSLYGFSQSVATHKGLQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPSYTACYGTSTQFLLGKGLLISPVLEQGKTQVNALFPPGTWYSMSDPTSFVTSKNGVNVNLDAPLHVVNVHLYQNIILPMQRGGLLSKEARMTPFTLVITFPAGATEGEAQGNLYLDDDELPEMKLGNGYSTYVDFYASLKQGSVKIWSQVQEGKFALDKGWIIEKVSILGLEGSASPSSLELDGIPLVGGEVRTSQLKYSPAGQEDYEQTTMTVDVNGLKIPVGKNFAMTWKMGVSH 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1472 927 Gene3D - 765 926 IPR013780 -
Lele52g1472 927 FunFam Alpha-glucosidase 1 663 763 - -
Lele52g1472 927 Pfam Glycosyl hydrolases family 31 276 766 IPR000322 GO:0004553|GO:0005975
Lele52g1472 927 Pfam Galactose mutarotase-like 187 255 IPR025887 -
Lele52g1472 927 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 52 185 IPR031727 -
Lele52g1472 927 ProSitePatterns Glycosyl hydrolases family 31 active site. 448 455 IPR030458 -
Lele52g1472 927 SUPERFAMILY Galactose mutarotase-like 36 283 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele52g1472 927 FunFam Alpha-glucosidase 1 33 296 - -
Lele52g1472 927 CDD GH31_N 177 295 - -
Lele52g1472 927 CDD GH31_MGAM_SI_GAA 295 675 - -
Lele52g1472 927 Gene3D Glycosidases 297 662 - -
Lele52g1472 927 SUPERFAMILY Glycosyl hydrolase domain 680 760 - -
Lele52g1472 927 PANTHER ALPHA-GLUCOSIDASE 56 892 - -
Lele52g1472 927 Gene3D glycosyl hydrolase (family 31) 33 296 - -
Lele52g1472 927 Gene3D - 663 762 IPR013780 -
Lele52g1472 927 SUPERFAMILY (Trans)glycosidases 286 678 IPR017853 -
Lele52g1472 927 FunFam Maltase-glucoamylase, intestinal 297 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1472 Lele-ChrLele52 18718691 18723105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g1472 36 926 Glycoside Hydrolase AT1G68560 75.561 0.0 1462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1472 52 18718691 18723105 Lele52g1472 52 18718691 18723105 ECH
Lele49g1311 49 8933177 8937516 Lele52g1472 52 18718691 18723105 hybridization
Lele50g1519 50 20338634 20343065 Lele52g1472 52 18718691 18723105 hybridization