Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1098 ATGGCGTCCCAAGAGCCATACGACGCCATTGCTGGGTTGACCAAGCTTCTCAGTGAGAAAGCTGAATTGGGAGGCATCGCCGCCGCAAAGATCAAGAAGTTGACCGCGGAGCTAGAGGCGATCAGTGAGACGCCGTTTAACCCGGACCTGAGGATCAAAACCGGCTTCCATTATTTCAAGACAGAAAAATTCCAGAAATTTCCAGATGTATTTGGGCAACTTGCGAAAGGGCAGAGTCCAAAGTTTATGGTATTTGCATGCTCAGACTCGAGAGTGTGTCCATCGCATATTCTGAATTTCCAACCCGGCGAAGCCTTTGTCGTCAGAAACATCGCCAACATGGTCCCACCTTATGACAAGACAAGGTATGCAGGAGCAGGAGCAGCCATTGAATACGCAGTGTTGCATTTGAAGGTGGAGAGTATCGTGGTGATGGGACATAGCTGTTGTGGAGGGATAAAAGGACTCATGTCTATCCCTGATGATGGAAACTCTTCCTCTGAATTCATAGAGCAGTGGGTCCAAATTTGTAATCCAGCAAGGTCCAAAGTTAAATCAGAAGCAGACAAAAAAACAAGCTTTGAGGACCAGTGCACCAACTGTGAGAAGCAAGCCGTGAATGTATCGCTTGGGAACTTGTTGACGTATCCATTTGTGAGAGAAGGGCTTTTGAAGAACACACTGAGTCTGAAGGGTGCCTATTACAATTTCATTAATGGAACTTTTGATTTGTGGGATCTCGACTTCAAGATTTCTTCTTCTCTCACTGTCTAA 774 0.4612 MASQEPYDAIAGLTKLLSEKAELGGIAAAKIKKLTAELEAISETPFNPDLRIKTGFHYFKTEKFQKFPDVFGQLAKGQSPKFMVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPYDKTRYAGAGAAIEYAVLHLKVESIVVMGHSCCGGIKGLMSIPDDGNSSSEFIEQWVQICNPARSKVKSEADKKTSFEDQCTNCEKQAVNVSLGNLLTYPFVREGLLKNTLSLKGAYYNFINGTFDLWDLDFKISSSLTV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1098 257 Pfam Carbonic anhydrase 83 241 IPR001765 GO:0004089|GO:0008270
Lele52g1098 257 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lele52g1098 257 FunFam Carbonic anhydrase 37 257 - -
Lele52g1098 257 Gene3D Carbonic anhydrase 47 257 IPR036874 GO:0004089|GO:0008270
Lele52g1098 257 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lele52g1098 257 SMART Pro_CA_2 75 246 IPR001765 GO:0004089|GO:0008270
Lele52g1098 257 CDD beta_CA_cladeB 55 245 IPR045066 GO:0004089|GO:0008270
Lele52g1098 257 PANTHER CARBONIC ANHYDRASE 43 249 IPR001765 GO:0004089|GO:0008270
Lele52g1098 257 SUPERFAMILY beta-carbonic anhydrase, cab 43 252 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1098 Lele-ChrLele52 7405452 7407566 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1098 52 7405452 7407566 Lele52g1098 52 7405452 7407566 ECH
Lele49g1041 49 6682423 6684864 Lele52g1098 52 7405452 7407566 hybridization