Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0963 ATGGAGAAGCGCGAGAGCTCCGCGTCCGAGCAAGAATCGGAGGGAAAGCACCCAACCCAACACCATCTCACCGTTCCGTCGGGTTTGACCCACGACGAGTTCGAGCAGCTCAAGCACTTCGTGACGGAGTACCACACCTACTTGGTGGGCCCGGGTCAATGCTCCTCCTTACTCGCGCAACGAATCAACGCGCCGATGGACACCGTGTGGTCCGTCGTGCGCCGTTTCGACAAGCCTCAGACCTACAAGCACTTCATCAAGAGCTGCGCAGTCCCGGAGGGTTTCGAAATGACGGTGGGGTGCACGAGGGAGGTGAATGTCATATCCGGTTTGCCGGCGGCTACCAGTACCGAGAGGCTGGATATACTGGACGACGACCGGCACGTGACGGGTTTTACTATCATCGGAGGGGAACACCGGCTGAGGAATTACCGGTCGGTGACGACGGTGCACGGGTTCGAGGGTGACGGGAAGATCTGGACCGTGGTTTTGGAATCATACATCGTGGATGTGCCGGAGGGTAACACCGAGGAGGACGCTCGTCTGTTCGCAGATACCGTTGTGAAGTTGAATCTGCAGAAGCTCGCCTCCGTCACCGAAGCGATGACCCGTGACGGTGACGGTAAGTCGCAGTTGGGCTGA 642 0.5872 MEKRESSASEQESEGKHPTQHHLTVPSGLTHDEFEQLKHFVTEYHTYLVGPGQCSSLLAQRINAPMDTVWSVVRRFDKPQTYKHFIKSCAVPEGFEMTVGCTREVNVISGLPAATSTERLDILDDDRHVTGFTIIGGEHRLRNYRSVTTVHGFEGDGKIWTVVLESYIVDVPEGNTEEDARLFADTVVKLNLQKLASVTEAMTRDGDGKSQLG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0963 213 CDD PYR_PYL_RCAR_like 54 200 - -
Lele52g0963 213 Pfam Polyketide cyclase / dehydrase and lipid transport 60 200 IPR019587 -
Lele52g0963 213 MobiDBLite consensus disorder prediction 1 19 - -
Lele52g0963 213 Gene3D - 16 211 IPR023393 -
Lele52g0963 213 MobiDBLite consensus disorder prediction 1 27 - -
Lele52g0963 213 SUPERFAMILY Bet v1-like 54 198 - -
Lele52g0963 213 PANTHER - 53 197 - -
Lele52g0963 213 FunFam Abscisic acid receptor PYR1 17 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0963 Lele-ChrLele52 6285555 6286196 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0963 52 6285555 6286196 Lele52g0963 52 6285555 6286196 ECH
Lele49g0928 49 5816327 5816968 Lele52g0963 52 6285555 6286196 hybridization
Lele50g0984 50 6241197 6241838 Lele52g0963 52 6285555 6286196 hybridization