Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0942 ATGGCGCCTTCATTTTATGATCCCTCTGTCAGCACGGTTTGTGTGATGGACGCTTCGGGCCACCTCGGATTCAGTTTGGTTAAGCGACTCCTTCAACGGGGCTATACCGTTCATGCTTCTGTTCAAGATCATGGGGAGGAGCAATTCCGTCGGCTCTCCGCGGATTCCGACGATAAGCTCAAGATTTTCCGCTTGGATCCGTTTGATTACCATAGCATAATCGATGCGCTCAAAGGCTGCTCTTGCTTGTTTTACAACTTTGAGCCTCCGAAAGATCAGGCTGATTATGATGAATTCATGGCGGATGTGGAGGTCAGAGCCGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAGGCCATTGATAAAGTGGTGTTCACATCCTCAGCCACCGCAGTTGTATGGAGGGAGGATCGCAAATCCCTGGATTTTGACTTGGATGAAAGACATTGGAGCGATGTCAACTTATGTCGAAAGTTCAAGCTATGGCATGGGATGTCAAAGACGGTGGCGGAGAAGACAGCTTGGGCGTTGGCGATGGACCGAGGGGTGAACATGGTGTCCATAAACGCCGGCTTGTTGATGGACGACCCTGATCTCTGCATCAAGACTCCATACTTAAGAGGAGCCGCCGAGATGTATGAGGACGGCATGTTCGTGACCGTCGATCTCGACTTCTTGGTGGATGCCCACCTCTGTGTGTTCGAAGACATCTCATCCTACGGTCGCTATTTGTGCTTCAATCGCGTCATCAATACTCACCAAGACGCCGTGACCCTTGCTCGCAAGTTGACTCCTTCAGCCCCTTCCATGTCCCCCAGGGAGGAGGATAAGAGGTTTATAGAGCAAAGAATAAGCAACAAGAAGTTGAACAAGTTGATGGTGGATTTCCAGAGTTGA 900 0.5022 MAPSFYDPSVSTVCVMDASGHLGFSLVKRLLQRGYTVHASVQDHGEEQFRRLSADSDDKLKIFRLDPFDYHSIIDALKGCSCLFYNFEPPKDQADYDEFMADVEVRAAHNVLEACAQTEAIDKVVFTSSATAVVWREDRKSLDFDLDERHWSDVNLCRKFKLWHGMSKTVAEKTAWALAMDRGVNMVSINAGLLMDDPDLCIKTPYLRGAAEMYEDGMFVTVDLDFLVDAHLCVFEDISSYGRYLCFNRVINTHQDAVTLARKLTPSAPSMSPREEDKRFIEQRISNKKLNKLMVDFQS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0942 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 290 - -
Lele52g0942 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 273 IPR036291 -
Lele52g0942 299 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 6 299 - -
Lele52g0942 299 Pfam NAD(P)H-binding 18 133 IPR016040 -
Lele52g0942 299 CDD FR_SDR_e 13 295 - -
Lele52g0942 299 Gene3D - 5 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0942 Lele-ChrLele52 6136584 6139879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0942 13 297 Miscellaneous Gene Families AT5G19440 32.323 7.64e-42 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0942 52 6136584 6139879 Lele52g0942 52 6136584 6139879 ECH
Lele49g0910 49 5686501 5689555 Lele52g0942 52 6136584 6139879 hybridization
Lele50g0965 50 6106682 6110129 Lele52g0942 52 6136584 6139879 hybridization