Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0842 ATGGAAAACCCTCCTCCTGGACGCAGATTCACAGGAATCTTCTTCATAATCATAATCTCCATTCTCTTCGGCATAATCTCCTTCATCTCTTGTATTGTAGCTGAGTTCAAGAGAAATAAGAAAGAGGATTTGAGATGGAATGGAAGATTGTGTTCCATGCCATCAAGCCCTGCATTTGGGTTTGGTATTGCAGCTCTGATCAGCTTATTCTTTGCCCAAATTATTGGGAATTCTGCTTTCTTGATGAATTCTTGTTCAGGAGGGAAAAGAAATGTCAGTTTTAAGATACCAGCAATTTCAAAGGCTCTGCTTCTGATCTCTTGGCTGAGCTTTGGGGTTGCAGTAACAATGCTGATATCAGCAACAAGCATGAGCAGAAGACAACGTTATGGAGAAGGTTGGTTGAATGGTGAGTGCTACATTGTAAGAGGAGGCACTTACGTTGGATCAGCCATGTTGATCCTTGTGGCACTTGCTTCTTGTACCACAGGATCATTGCTCTCTACAGTGATGATGATGAAGACCACACAAGCAGAAGAGAATCGTAAAGTGCACGCTCAAATGGGGTAA 570 0.4246 MENPPPGRRFTGIFFIIIISILFGIISFISCIVAEFKRNKKEDLRWNGRLCSMPSSPAFGFGIAALISLFFAQIIGNSAFLMNSCSGGKRNVSFKIPAISKALLLISWLSFGVAVTMLISATSMSRRQRYGEGWLNGECYIVRGGTYVGSAMLILVALASCTTGSLLSTVMMMKTTQAEENRKVHAQMG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0842 189 PANTHER OS07G0462200 PROTEIN-RELATED 17 177 - -
Lele52g0842 189 Pfam Protein of unknown function (DUF1218) 65 158 IPR009606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0842 Lele-ChrLele52 5404701 5406429 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0842 52 5404701 5406429 Lele52g0842 52 5404701 5406429 ECH
Lele49g0818 49 5019237 5020826 Lele52g0842 52 5404701 5406429 hybridization
Lele50g0855 50 5344858 5346372 Lele52g0842 52 5404701 5406429 hybridization