Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0788 ATGGGGTGCGCTTCCTCCAAGCGTATCGAAGCTAACGTCGATGGGTACCGGCCGGCACCGGCGAGCTTCGCGGTGTTTGACATCAACGCCATCGAAGAACCATGGCTGAAGCTAAACGGCTCACAGATTGCTCAGGAGCAAAAGGACAAAGCCCCCAACCCTAATTTGCCTCCTCCTATTCTGCAGAAGCTCAACAAGCTCGAGACCACCGAGGCTCCTCAGTCATGGGCCGAACTCAGCAAAGCACTCGACGACCTCAAGCCCAACCTCGCCGTCGCCGACGCCAAACCCGTCGTCGTTAAACCTCCGTCGTCTACTCCAACGACGAAGCGGGCCCCAGAGAAAAGCACGTCGTTCCATACGTTGGAAGAGTTGGACGCCCAACTAAACCCTAAGCCGAATAAAGGCCTACGAAAGACGGAGTCCATGCGGGATGAACCGAAGAAACCCCCAGAGGAAAACAAAGAGGAGAGAACGAAAGAAGAACTTGGAGAAGGATTCAAATCCGTGAAGAACAACATATTCATAGTGAGGGACAGAGAGGAGAGAGAGAAAGAAGGGAAGCAAGCGAATTACGACAAGATAGCGAAGCTGAGGAGGGATCCACTGAGTGACTTCCCGGAGAAGTGCCCGCCGGGAGGGAAAGAAGGGGTGGTGATATACACGACGTCGTTGGGAGGAGTGAGGAAGACCTTCGAGGACTGTAACAAAGTGAGGGAAGTGTTGGAGGCACAGAGGGTGGTGTACGACGAGAGGGACGTGTCGTTGCACGGAGAGTTTCTGAAGGAGATGAAGGAGATGGTGGGGGAAGGAGTTACAGTGCCGAGAGTGTTCGTGAAAGGGAGGTACGTGGGCGGGGCAAAGGAGGTGGTGGAGCTGAACGAGTCGGGTCGTCTCGGGCGGATCCTAAGTGCGACCCGAGTGGAGAGAGGGATAGGGAGACAAGCGTGCGAGGGATGTGGTGGGGCCAGGTTCGTGCCATGCTGGGAATGTGGCGGGAGCTGTAAGCTGATAGAGACGACGTCGTCTGGAGAAGATGTGAAACGCAGGTGCCCGCACTGTAATGAAAATGGCTTGGTTCACTGTCCTGCTTGCCTTTCACTTTGA 1107 0.5528 MGCASSKRIEANVDGYRPAPASFAVFDINAIEEPWLKLNGSQIAQEQKDKAPNPNLPPPILQKLNKLETTEAPQSWAELSKALDDLKPNLAVADAKPVVVKPPSSTPTTKRAPEKSTSFHTLEELDAQLNPKPNKGLRKTESMRDEPKKPPEENKEERTKEELGEGFKSVKNNIFIVRDREEREKEGKQANYDKIAKLRRDPLSDFPEKCPPGGKEGVVIYTTSLGGVRKTFEDCNKVREVLEAQRVVYDERDVSLHGEFLKEMKEMVGEGVTVPRVFVKGRYVGGAKEVVELNESGRLGRILSATRVERGIGRQACEGCGGARFVPCWECGGSCKLIETTSSGEDVKRRCPHCNENGLVHCPACLSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0788 368 ProSiteProfiles Glutaredoxin domain profile. 206 310 - -
Lele52g0788 368 MobiDBLite consensus disorder prediction 97 164 - -
Lele52g0788 368 SUPERFAMILY Thioredoxin-like 211 303 IPR036249 -
Lele52g0788 368 MobiDBLite consensus disorder prediction 137 164 - -
Lele52g0788 368 Gene3D Glutaredoxin 216 310 - -
Lele52g0788 368 CDD GRX_GRX_like 217 362 - -
Lele52g0788 368 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 117 365 - -
Lele52g0788 368 Pfam Glutaredoxin 218 284 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0788 Lele-ChrLele52 4981126 4982232 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0788 52 4981126 4982232 Lele52g0788 52 4981126 4982232 ECH
Lele49g0760 49 4602941 4604047 Lele52g0788 52 4981126 4982232 hybridization
Lele50g0802 50 4927467 4928573 Lele52g0788 52 4981126 4982232 hybridization