Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0762 ATGAGCAACCGTTTGGATTTGCTGACGCTATGCATTGAGGCGGCATGTGAGAGTAGAGAGAGCGTCGACAAATGGCGAAGGCAGAGGCGTAGTCTGGAGCGCTTGCCCTCTCCTCTTGCCGATGCTCTGCTCCGCCGCCTCCTTAGCCGTAGTCTCCTATACCCTTCCCTGCTTGAAGTTTTCAAAGAGAGTGCTGAAGAGATTGATGTCAGAGGTGAAAACTCTGTGGATGCTGAGTGGATGGCATATTTGGGTGCATTTCGCCACTTGCGTTCCTTGAATGTTGGAGGCTGCCATAGAATCACCAGTTCAGCCTTATGGGCTATTACAGGAATAACTAGTTTACAGGAGTTGGATCTTTCAAGATGCTCGAAGGTCAATGATGCTGCTATTAAGCACATGCTTTCCTTAACAAATTTGGAGAAGTTACACATTGCTGAAACAGGTGTGACAGCAGAAGGGGTCAAACTTCTTGCCTCCCTTAAAGCCCTGTCTGTTCTTGACTTGGGTGGTTTACCTGTAAATGATGCGGCTTTAAATTCTTTACAGGTGCTGAAAAAGCTACAATACCTGGACCTTTGGGGTAGTCAAATTTCAAATGAAGGTTCTGCTATTCTCAATATGTTCCCCAAGTTAAGCCATCTAAATCTTGCTATGACCAGTGTCACAAGATTGCCTAATTTATTATCTCTTGAATGTTTAAACATGAGTAATTGTACTATTGACTCAGTACTTAAAGATGGTAAAGCTCCTTTGGCAAAGCTTGTTCTTTCTGGCACTACGTTTCTGAATGAAGCTGATGCCTTATTACATCTAAATGCAAATTTGTTATCTTTTTTGGATGTATCAAATTCTTGCTTTCACAACTTCTACTTCTTAAGTAAGATGAAAGTAATAGAACATCTAAATCTCAGCTCATGCATGATTGGAGATGATTCAGTTGAAATAGTTGCACTCATTGGCGGAAACTTGAAAAGTTTGAATCTCAATGGTACTAGAGTTAGCTCTGCCGGAGTGGGAATTTTGGCTGGACATGTTCCCAGTCTTGAGATTCTGTCATTATCTGAGACACCAATAGATGATGCTGCCATCTCATATATTGGCTTGATGCCTTCATTAAAGGCTGTGGACCTGAGCAATACAATCATTAAAGGTTTTATGCACCAGGAAGAGACTGAACTAGATGCTCCTCTCTCTCTAACAGCCCTACAGAATCTTAAACAATTGGAAAGGTTGAATTTGGAGCACACACTTGTTAGCGATGGAGCATTATGCCCTCTGTCAAGCTTCCAACAGCTGAGATACATCTCTCTGAAAAGCTTTTCACTGGCTGACATATCGCTTGATTATTTGTCAACAATTCCTAAACTGATAAGTCTTAGCTTGTGTGATGCCATATTGACAAATTATGGGCTTGAAAATTTTAAACCTCCAGCAACTTTGAAATCAATGGACCTCTCTGGCTGTTGGCTCTTGACAAGAGACGCTATCTTATCATTTTGTGGAATTCATCCTCAAATTGAAGTAAGACATGAACTCAAGACTGAAGTGCCTGATGACCGAAACAGGCCTAATCAGCCTACTTCATCTCGATTGGCATCAAGGTCTGTACAAGGGACGAAGAAGAAAGAAACCATGGCCGTGTCTCCAAGTTTTATAGATCAAAGAGTGAAGTATACGAGAGACGAGTTACTTGCATTGCAGTCCATGTCCTTGGTCCATGCATCTGATGACGAGAGATGCTCTGTAGTGTCTGAGAAGCAGTTAGACTGA 1773 0.4208 MSNRLDLLTLCIEAACESRESVDKWRRQRRSLERLPSPLADALLRRLLSRSLLYPSLLEVFKESAEEIDVRGENSVDAEWMAYLGAFRHLRSLNVGGCHRITSSALWAITGITSLQELDLSRCSKVNDAAIKHMLSLTNLEKLHIAETGVTAEGVKLLASLKALSVLDLGGLPVNDAALNSLQVLKKLQYLDLWGSQISNEGSAILNMFPKLSHLNLAMTSVTRLPNLLSLECLNMSNCTIDSVLKDGKAPLAKLVLSGTTFLNEADALLHLNANLLSFLDVSNSCFHNFYFLSKMKVIEHLNLSSCMIGDDSVEIVALIGGNLKSLNLNGTRVSSAGVGILAGHVPSLEILSLSETPIDDAAISYIGLMPSLKAVDLSNTIIKGFMHQEETELDAPLSLTALQNLKQLERLNLEHTLVSDGALCPLSSFQQLRYISLKSFSLADISLDYLSTIPKLISLSLCDAILTNYGLENFKPPATLKSMDLSGCWLLTRDAILSFCGIHPQIEVRHELKTEVPDDRNRPNQPTSSRLASRSVQGTKKKETMAVSPSFIDQRVKYTRDELLALQSMSLVHASDDERCSVVSEKQLD 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0762 590 SMART LRR_CC_2 113 137 IPR006553 -
Lele52g0762 590 SMART LRR_CC_2 87 112 IPR006553 -
Lele52g0762 590 SMART LRR_CC_2 406 430 IPR006553 -
Lele52g0762 590 SMART LRR_CC_2 161 185 IPR006553 -
Lele52g0762 590 SMART LRR_CC_2 296 320 IPR006553 -
Lele52g0762 590 Gene3D Ribonuclease Inhibitor 13 150 IPR032675 -
Lele52g0762 590 Pfam Leucine Rich repeat 137 159 IPR001611 GO:0005515
Lele52g0762 590 SUPERFAMILY RNI-like 400 501 - -
Lele52g0762 590 SUPERFAMILY RNI-like 79 384 - -
Lele52g0762 590 Gene3D Ribonuclease Inhibitor 151 251 IPR032675 -
Lele52g0762 590 Gene3D Ribonuclease Inhibitor 393 516 IPR032675 -
Lele52g0762 590 PANTHER - 276 438 - -
Lele52g0762 590 Gene3D Ribonuclease Inhibitor 261 392 IPR032675 -
Lele52g0762 590 MobiDBLite consensus disorder prediction 522 543 - -
Lele52g0762 590 MobiDBLite consensus disorder prediction 515 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0762 Lele-ChrLele52 4828094 4831459 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0762 52 4828094 4831459 Lele52g0762 52 4828094 4831459 ECH
Lele49g0735 49 4471254 4473961 Lele52g0762 52 4828094 4831459 hybridization
Lele50g0775 50 4782704 4786077 Lele52g0762 52 4828094 4831459 hybridization