Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0667 ATGGATCTTAAGGCTGTTAAATCAGACCTAGTCTTGATTTTAGACTATGGTTCCCAATATACTCACCTCATCACTCGTCGAATTCGAAGCCTGTCCGTTTTCTCTCTCTGCATCTCTGGCACTTGCCCTCTCAAATCCATAACCGACCTCAAGCCTAGCGTTGTTATTCTATCGGGCGGCCCTCATTCTGTCCACACCCCCGACTCCCCAAGTTTTCCGGATGGTTTTATTGAATGGGCTGAGTCAAATGGCGTATTTGTGCTCGGCATTTGCTATGGACTCCAGTTATTAGTGCAGAGGATGGGCGGTGAGGTGACGGTTGGACTGAAACAAGAGTATGGGAAGATGGAAATCCATGTGGAGAAGCCTTCTGGGCTTTTTGTGTCGAAGAACGTTGGGTCTAAACAGTTTGTCTGGATGAGCCATGGTGATGAGGCTGCCAAGGTGCCTGATGGGTTTGAGGTGGTCGCAAGGAGCGAGCAAGGTTCGGTAGCGGCCATACAGAACCCATCAAGGAAGTTTTATGGCCTTCAGTATCACCCCGAGGTGACACATACGCCTGAAGGAATGGAAACATTGCGGTGCTTTCTCTTTGAGGTTTGTAAAGTCGCAGCAGGCTGGAAGATGGAAAATGTGTTGGATGAAGAAATAAAAGTTATCAAAGATACAGTGGGGCCTCAAGAACATGTCATTTGTGCATTATCAGGGGGTGTGGATTCCACAGTTGCCGCTACTATTGTCCATAAAGCAATTGGAGACCGGCTTCATTGCGTATTTGTTGACAATGGACTACTTAGGTATAAAGAGAGAGAACGTGTGATGGAAACTTTTGAAAAGGATCTTCATTTACCGGTTACTTGTATTGATGCTTCAGATCAGTTTCTTAATAGTTTGAAAGGTGTAACGGATCCAGAGATGAAGAGGAAAATTATTGGAAAAGAGTTTATCTATATCTTTGATTCTTTTGCGCAAGATTTAGAGCTTAAACTAGGAAGCAAACCATCTTACTTGGTGCAAGGAACTCTGTATCCAGATGTGATTGAATCTTGTCCACCACCTGGAAGTGGAAGAACTCATTCTCATACTATTAAGAGCCATCATAATGTTGGGGGGCTTCCCGAGGACATGAAATTGAAGCTTATTGAACCTATTAAATGTTTATTCAAGGATGAGGTTCGCCGATTAGGGAGAATCATGGATGTGCCTGAGGGATTTTTAAAACGTCATCCATTCCCGGGACCCGGTCTTGCTGTACGAGTCTTAGGTGATGTAACTGAAGGCAATGCCTTAGACATCCTCCGCCAGGTTGATGAGATCTTTATCCAATCAATCAAGGATGCTGGGCTTTATGATTCAATTTGGCAAGCGTTTGCAGTGTTCTTGCCAGTTAGATCTGTTGGAGTTCAAGGTGATCAAAGAACACATTCCCACGTTGTTGCCCTCAGAGCTGTTACTAGTCAAGATGGAATGACAGCAGACTGGTACTACTTTGAGCACAAGTTCCTGGATGATGTTGCAAGGAAGATTTGTAACAGTATACGTGGTGTAAACCGTGTTGTGCAAGACATTACGTCAAAGCCTCCATCTACCATTGAATGGGAATGA 1605 0.4442 MDLKAVKSDLVLILDYGSQYTHLITRRIRSLSVFSLCISGTCPLKSITDLKPSVVILSGGPHSVHTPDSPSFPDGFIEWAESNGVFVLGICYGLQLLVQRMGGEVTVGLKQEYGKMEIHVEKPSGLFVSKNVGSKQFVWMSHGDEAAKVPDGFEVVARSEQGSVAAIQNPSRKFYGLQYHPEVTHTPEGMETLRCFLFEVCKVAAGWKMENVLDEEIKVIKDTVGPQEHVICALSGGVDSTVAATIVHKAIGDRLHCVFVDNGLLRYKERERVMETFEKDLHLPVTCIDASDQFLNSLKGVTDPEMKRKIIGKEFIYIFDSFAQDLELKLGSKPSYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPEDMKLKLIEPIKCLFKDEVRRLGRIMDVPEGFLKRHPFPGPGLAVRVLGDVTEGNALDILRQVDEIFIQSIKDAGLYDSIWQAFAVFLPVRSVGVQGDQRTHSHVVALRAVTSQDGMTADWYYFEHKFLDDVARKICNSIRGVNRVVQDITSKPPSTIEWE 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0667 534 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 10 206 - -
Lele52g0667 534 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 196 428 - -
Lele52g0667 534 FunFam GMP synthase [glutamine-hydrolyzing] 419 534 - -
Lele52g0667 534 Pfam Glutamine amidotransferase class-I 13 199 IPR017926 -
Lele52g0667 534 CDD GMP_synthase_C 229 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Lele52g0667 534 FunFam GMP synthase [glutamine-hydrolyzing] 208 418 - -
Lele52g0667 534 Pfam GMP synthase C terminal domain 443 533 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Lele52g0667 534 Hamap GMP synthase [glutamine-hydrolyzing] [guaA]. 8 534 IPR022955 GO:0003922|GO:0006177
Lele52g0667 534 Gene3D - 419 534 - -
Lele52g0667 534 Gene3D - 3 204 IPR029062 -
Lele52g0667 534 SUPERFAMILY Class I glutamine amidotransferase-like 9 237 IPR029062 -
Lele52g0667 534 TIGRFAM guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 203 IPR004739 GO:0003922|GO:0005524|GO:0006177
Lele52g0667 534 CDD GATase1_GMP_Synthase 11 197 IPR004739 GO:0003922|GO:0005524|GO:0006177
Lele52g0667 534 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 207 408 IPR025777 GO:0003921|GO:0005524
Lele52g0667 534 SUPERFAMILY GMP synthetase C-terminal dimerisation domain 413 534 - -
Lele52g0667 534 FunFam GMP synthase [glutamine-hydrolyzing] 8 205 - -
Lele52g0667 534 PRINTS Glutamine amidotransferase superfamily signature 55 64 - -
Lele52g0667 534 PRINTS Glutamine amidotransferase superfamily signature 176 189 - -
Lele52g0667 534 PRINTS Glutamine amidotransferase superfamily signature 86 97 - -
Lele52g0667 534 TIGRFAM guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 534 IPR001674 GO:0003922|GO:0005524|GO:0006164|GO:0006177
Lele52g0667 534 Gene3D HUPs 208 418 IPR014729 -
Lele52g0667 534 PANTHER GMP SYNTHASE-RELATED 9 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0667 Lele-ChrLele52 4226978 4229245 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0667 52 4226978 4229245 Lele52g0667 52 4226978 4229245 ECH
Lele49g0646 49 3908153 3910647 Lele52g0667 52 4226978 4229245 hybridization
Lele50g0675 50 4155920 4164990 Lele52g0667 52 4226978 4229245 hybridization