Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0661 ATGGTGGAATCCATTGCTGCAATTTCGCTTCTTGGCCATCGACCTGTCTGTGGAGGAAATTTATCCAGGGATGTATCTGGTAAACGTAAAACGTTGATTCAGTATCGATTCCCAGCAACAGAATTCCTTGGTGGAAGGATTATTATATCATTATCTTTGCCTAAAACAAAAACGGATGGCTTCCTGTCATCATCAATTAAGGCTCTGGCAATGGAGCTTACCAAAGAGGCATATGCGTACAGGGAAGAGAGAATACCAAAGAAAGAAAGTAATGGGGTTGATCGGGGCTTTGAAAGCAGACCTGCTTTGTGGCCACCAGCTAACAGAGCAGATAACCCTTCGCTTCACAATCCCTTACTTAGACAAGAAAGAATGGGATGTGGCTGGTTGGGTGCCATATTTGAGTGGGAAGGGGTTCTCGTTGAAGATAATATTGATCTTGAGAAGCAAGCTTGGCTAGCTCTTTCTGAAGAAGAAGGAAAGTCCCCTCCTCCAGCTTTTATCCTTAAGAGAATAGAAGGGATGAAGAATGAACAAGCGATATCTGAAGTTCTATGCTGGTCCAGGGATCCAGCTGAGTTAAGAAGAATGGCTAATAGAAAAGAAGAAATTTACCGGGCTTTGCAAGGTGGGATATATGGGCTAAGGGCTGGGTCAAGAGAGTTTGTTAGTGTTTTGATGCATTATAAGATACCAATGGCGTTGGTTTCTACTCGTCCCAGAAAAACAATCGAGTCTGCTGTGGGAACAATTGGATTTGAAGAGAATTTCAGCGTTATTGTAGCAGCTGAGGATGTACATAGGGGAAAGCCTGATCCAGAAATGTTTGTGTATGCAGCGCAGCTTTTGAACTTTATACCTGAAAGGTGCATTGTATTTGGGAACTCAAATCAAACCGTGGAGGCTGCGCATGATGCCCGGATGAAGTGCGTGGCTGTTGCTAGTAAGCACCCTGTCTATGAGCTTGGGGCCGCGGACTTGGTTGTAAGGCGCCTGGATGAGCTTTCAGTGGTTGATTTGAAGAACCTCGCAGACATTGAATCTTCTGAATTTGGGTCTGTGGAGCCTGAGTTGGAGCTGGAGGAGGATTCAGATTTAGACATATCATCTGTTGACGACAATTTCTGGTAA 1131 0.4447 MVESIAAISLLGHRPVCGGNLSRDVSGKRKTLIQYRFPATEFLGGRIIISLSLPKTKTDGFLSSSIKALAMELTKEAYAYREERIPKKESNGVDRGFESRPALWPPANRADNPSLHNPLLRQERMGCGWLGAIFEWEGVLVEDNIDLEKQAWLALSEEEGKSPPPAFILKRIEGMKNEQAISEVLCWSRDPAELRRMANRKEEIYRALQGGIYGLRAGSREFVSVLMHYKIPMALVSTRPRKTIESAVGTIGFEENFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRRLDELSVVDLKNLADIESSEFGSVEPELELEEDSDLDISSVDDNFW 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0661 376 SUPERFAMILY HAD-like 132 335 IPR036412 -
Lele52g0661 376 Gene3D Putative phosphatase; domain 2 142 215 IPR023198 -
Lele52g0661 376 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 1 376 - -
Lele52g0661 376 Gene3D - 132 330 IPR023214 -
Lele52g0661 376 CDD HAD_BPGM-like 192 315 - -
Lele52g0661 376 Pfam Haloacid dehalogenase-like hydrolase 146 313 IPR041492 -
Lele52g0661 376 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 247 313 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0661 Lele-ChrLele52 4180259 4181389 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0661 52 4180259 4181389 Lele52g0661 52 4180259 4181389 ECH
Lele49g0641 49 3869855 3870985 Lele52g0661 52 4180259 4181389 hybridization
Lele50g0669 50 4109180 4110310 Lele52g0661 52 4180259 4181389 hybridization