Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0647 ATGTTTCGTTCCACCAGATGGAGGAGCGAGAAGCTCAGGATCAAAGCTGTTTTCAAACTCCACTTTCATGCTACTCAGGTGCTGCAATCTGGGGTAGATGCATTGGCGATATCTATAATTCCGGTGGACGTCGGAAAGCCAACTACGAGATTAGAGAATGCAACAGTTCGAGACGGAATTTGTAGATGGGAAAATCCGGTCTATGAAACAGTCAAATTTATTCAGGAGCCTAAGACTGGGAAGATCAATGATAAAATCTATCATTTTATAGTTTCAACGGGATCACCGAAAGCTGGTTCCATTGGCGAAGTTTCTATCAATTTCGCTGATTTTGCTAAAGCTACTAAGCCCTCCTCTGTTTCTCTTCCTATCAAGAATTCTTGCAGCGGTACCGTTTTGCATGTGACGATTCAGAGGCTACATGAAAATGGGGATCAAAGAGAGGAGGAAAAAAGTGAAGATGTCAAAATTCTATCCAGTGATGAGAGAAGCTTAAGGACCTTTCTAAGCAACGCAGATACAAATAAAAGCACTACGATGAATTCTGCGGAAGACGTCTCTGCCGAAGCAATGATTCAGAGAGCTGAACTGAGTGCTGATTGCAGAACATCCAGCGAATCCGATCTTACATTGTCCAGTTCCGATGGCAGCTATGGACTTGATACTCCCCGACGACTTGGACTAAGAAATACAAAAAATAACCACCACAACCCAAATGCCTCGCCATTAACAACATCAATGTATGAGAGATCACACTGGGACTGGTCAGCTAGTTCAGATCATGGTTTGAGTACAGATGATTCACCGAATGGTTCTCACGATGCACTTCATAAGGAAAGATCCCAACAGTCGTCGGATTTGGAGATTGAAAGACTCAAATCTGAACTTGCCTCTTTGGCTAGGCAGCTCGATATGTCTGACTTGGAACTGCAGACTCTTCGCAAGCAAATTGTAAAAGAAAACAAACGAGGGAAAGATCTCTCAAAGGAAATTACCAGCTTGAAAGAGGAAAGAGATGGTCTCAAGGCAGAGTGTGACAACCTCAGGTCACTTCACAAACGTATGGATGAGGCTAAAGTGAGGAACAGAACACAATTGGAAGGTGGTGATCTGCGCACTCTTGTTGAAGAAATTCGACAGGAACTGAGTTATGAAAAGGACCTTAATGCCAATCTTCGATTGCAGTTGCAGAAGACGCAGGAATCGAATGCTGAATTGGTTCTTGCTGTACAAGACCTGGATCAAATGTTGGAGCAGAAAGATGTGGAAATTAACAATCTTTCCAATAAGATTGAATTGAGCAGAGATTCCCAGGAGTTAAAGGGAAACCTCTCCAAATGTGGAATAGATGACGATGAAGAGCAGAAAGTATTGGAGGAGATTGTTAAAGAGCAGCAAAGCAAGTCCAAGGACTCACAGTTACTTGAGCAGAAGATTTTGGAGCTGTATGGTGAAATAGATATGCATAAGAGAGACAAAGATGAGTTGGACATGCAGATGGAGCAGCTTGCACTTGACTACGAAATATTGAAACAGGAAAACCATGAAATGACATATAAGTTGGAGCAGAGTCAACTGCAAGAACAATTGAAGCAATACGATAGCTCTTCTCTTGCTGATGCTGTGAATGACCTTGAAAATCATATTGAAAGCCTCGAAAATGAACTGAAGGCACAGTCACAAGAATTATCAGATTCTCTGCAAACAGGTAAGGAACTCGAAAACCATATCAGAAGATTAGAGGGAGACCTGGAGAAACAAGCACGAGGATTTGAAGCTGACTTAGAAGCTGTGACGCGTGACAAAGTTGAGCGGGAGCAAAGAGCCATCCGAGCAGAGGAAGCTTTGAGAAAGACCAGATTGAAAAATGCTAATGCTGCTGGGAGGCTCCAAGAGGAATTCAAAAGGCTGTCAATGCAAATGGCCTCTACATTTGATGCAAACGAGAAGGCCACCATGAGAGCATATGCAGAGGCAAGTGAACTGCGTGCACAGAAAAACCTTTTGGAAGAAATGCTACATAAAGTCAAGGAAGAACTTCAGTCAGTTAAAGATGATTATGAGGTAAAACTAAATGATCTCTCCAATCAAATGGAATCGATGGCCACTCAGATACACCAGATGTTGATGGAAATTGAGGAGAAATCCAAGCTGCTCGAAAAACAGAAGAATCATGAGGAGCAAATTAGTAGGGAGTTCTCCGAAGAGATCCGGGCCTTAAAAACTGAGAATGAAAAGCTTAAAGGGGAGGTTATATACTACTCTGAGCAGGCAGAGCAGAAAGAGACTCTCAGAACTGAGTTGGAACTCACGAAGAAATCAGTTGAGGAATCTGAGACTCTGTTGCAGAGAGCAAGTTTTGAAAGAAATAAGCTGGTGAGTACAATTGCTTTACTGAAGAAGGAAGTGGAGAAGACACTTGAAGATCTAAATAGGATGAGGCTTGTGAAGGATGAAAAAGAGACTATGGCTAGGTCATTACAATCAGAGTTGGAAGCAGTTAGAGATCAATGCAGCGACTTGAAACATTCTCTTCATGAGGATGAGGCAGAGAAACAAAAACTGAGAAAGCAAATTTTCCAGTTAAAGGGTGAACTAAAGAAGAAGGAAGATGCAGTGACCAACATTGAAAAGAAGTTGAAGGATACTAATGGACACCAGCAGTTTTCTGCCACTGCAAAGAACAAAAAATCTGCTTCAATCCCTCAGAATTCGAAAGAGATTGAAACTCTGAGGGAAAGAATTAAAATGCTTGAGAAGGAGAATGAACTCCAAAACAAAATAGAGGAGCTGGAGAGCAAAGTGGAAGAATTCAATCAGAGTAGTGCTTTGCAAAAGGTTACTAAGGATCAAATTATTAGTCCTTCAACTGTTGGAGCCAGAGATTCAGCATCTCAAGAAAATTGCGATGAAAATTTGTCAGGGAAAGAAGCAAAAACCTGCAATGTTGATGAAGGAAATGTGAGCGATATATTAGAGGAACTAGCATCAGTGAAGGAAAAGAACAAATCAATGGAGAATGAATTAAAGGAGATGCAAGAGAGATACACAGAAATGAGCCTGAGATTTGCAGAAGTAGAAGGTGAAAGGCAAAAACTTGTTATGACAGTGAGGAACCTGAGGATTGCTTATAAGGTCAAATAA 3144 0.4151 MFRSTRWRSEKLRIKAVFKLHFHATQVLQSGVDALAISIIPVDVGKPTTRLENATVRDGICRWENPVYETVKFIQEPKTGKINDKIYHFIVSTGSPKAGSIGEVSINFADFAKATKPSSVSLPIKNSCSGTVLHVTIQRLHENGDQREEEKSEDVKILSSDERSLRTFLSNADTNKSTTMNSAEDVSAEAMIQRAELSADCRTSSESDLTLSSSDGSYGLDTPRRLGLRNTKNNHHNPNASPLTTSMYERSHWDWSASSDHGLSTDDSPNGSHDALHKERSQQSSDLEIERLKSELASLARQLDMSDLELQTLRKQIVKENKRGKDLSKEITSLKEERDGLKAECDNLRSLHKRMDEAKVRNRTQLEGGDLRTLVEEIRQELSYEKDLNANLRLQLQKTQESNAELVLAVQDLDQMLEQKDVEINNLSNKIELSRDSQELKGNLSKCGIDDDEEQKVLEEIVKEQQSKSKDSQLLEQKILELYGEIDMHKRDKDELDMQMEQLALDYEILKQENHEMTYKLEQSQLQEQLKQYDSSSLADAVNDLENHIESLENELKAQSQELSDSLQTGKELENHIRRLEGDLEKQARGFEADLEAVTRDKVEREQRAIRAEEALRKTRLKNANAAGRLQEEFKRLSMQMASTFDANEKATMRAYAEASELRAQKNLLEEMLHKVKEELQSVKDDYEVKLNDLSNQMESMATQIHQMLMEIEEKSKLLEKQKNHEEQISREFSEEIRALKTENEKLKGEVIYYSEQAEQKETLRTELELTKKSVEESETLLQRASFERNKLVSTIALLKKEVEKTLEDLNRMRLVKDEKETMARSLQSELEAVRDQCSDLKHSLHEDEAEKQKLRKQIFQLKGELKKKEDAVTNIEKKLKDTNGHQQFSATAKNKKSASIPQNSKEIETLRERIKMLEKENELQNKIEELESKVEEFNQSSALQKVTKDQIISPSTVGARDSASQENCDENLSGKEAKTCNVDEGNVSDILEELASVKEKNKSMENELKEMQERYTEMSLRFAEVEGERQKLVMTVRNLRIAYKVK 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0647 1047 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Lele52g0647 1047 Coils Coil 796 879 - -
Lele52g0647 1047 Coils Coil 282 351 - -
Lele52g0647 1047 Coils Coil 988 1029 - -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 884 905 - -
Lele52g0647 1047 Coils Coil 659 750 - -
Lele52g0647 1047 Coils Coil 535 569 - -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 271 287 - -
Lele52g0647 1047 Coils Coil 486 513 - -
Lele52g0647 1047 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 942 - -
Lele52g0647 1047 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 13 145 IPR019448 -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 257 287 - -
Lele52g0647 1047 Coils Coil 410 430 - -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 885 905 - -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 198 219 - -
Lele52g0647 1047 MobiDBLite consensus disorder prediction 197 245 - -
Lele52g0647 1047 Coils Coil 901 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0647 Lele-ChrLele52 4103743 4108210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g0647 52 4103743 4108210 Lele52g0647 52 4103743 4108210 ECH
Lele49g0626 49 3799060 3803511 Lele52g0647 52 4103743 4108210 hybridization
Lele50g0655 50 4017148 4021682 Lele52g0647 52 4103743 4108210 hybridization