Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0216 ATGCCTACACCTTCACCCACGTCGTCTTTCATTTGTATCTTCCTTTTCTTCTCCACTATCAGCACCACCTATGCCGCCCTTACTGCTCCGCGCTTCAAAGAAGCCCCAAAGTTCTACAACTCCCCCAACTGCTCCGATGACTCCGTCCACATTGCAATGACCCTCGACGTCACCTACCTTCGCGGCTCCATGTCCGCCATCCTCTCCGTTCTCCAACACTCTTCCTGTCCCGAGAACGTCGTCTTCCATTTTGTCTCCGCCGCTTCTAAGCCTTCTTCCGCTTCCACCCTCAACCTCACCGTCTCTGCCTCCTTCCCCTACCTCAAATTCCGATTCTACCCCTTCGACGACTTGACCGTCGCTGGACTAATCTCCTCCTCCATCCGCACTGCATTAGACTGCCCTCTCAACTATGCACGCAACTACCTCCCCAATCTCCTCCCTCCTTCTGTCCGCAAAGTCGTCTACCTCGACTCCGACTTGATCCTCGTGGATGACATTGCAGAACTCGCTGCCACTCCGATGCACTCCGATCAGGTCCTCGCCGCTCCCGAATACTGTAACGCCAATTTCACCAACTACTTTACGCCGACGTTTTGGTCCAATCCCTCCTTGTCCTTGACATTCTCGGGTCGTCGCGTGCCTTGCTACTTCAACACCGGGGTGATGGTGATCGATTTGGAGCGGTGGCGGACCGGGGATTACACGAGGAAGATTGAGGAGTGGATGGAGCTGCAGAAGAGAATACGGATCTACGAGCTGGGATCATTGCCCCCGTTCCTGCTGGTGTTCGCCGGGAACATAGCGCCGGTGGATCACAAGTGGAATCAACACGGTCTAGGCGGCGACAACTTTCGTGGCCTCTGCAGGGATTTGCATCCGGGCCCGGTGAGCCTATTGCATTGGAGCGGGAAGGGCAAGCCCTGGGTTCGGCTAGACGCCAACCGGCCCTGCCCCTTGGATGCCTTATGGGTTCCCTACGATCTGCTAGAGACGCCCTTCACCCTGGATGCTTAG 1017 0.5624 MPTPSPTSSFICIFLFFSTISTTYAALTAPRFKEAPKFYNSPNCSDDSVHIAMTLDVTYLRGSMSAILSVLQHSSCPENVVFHFVSAASKPSSASTLNLTVSASFPYLKFRFYPFDDLTVAGLISSSIRTALDCPLNYARNYLPNLLPPSVRKVVYLDSDLILVDDIAELAATPMHSDQVLAAPEYCNANFTNYFTPTFWSNPSLSLTFSGRRVPCYFNTGVMVIDLERWRTGDYTRKIEEWMELQKRIRIYELGSLPPFLLVFAGNIAPVDHKWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWVPYDLLETPFTLDA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0216 338 Pfam Glycosyl transferase family 8 50 311 IPR002495 GO:0016757
Lele52g0216 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 50 318 IPR029044 -
Lele52g0216 338 FunFam Hexosyltransferase 50 318 - -
Lele52g0216 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 49 329 IPR029044 -
Lele52g0216 338 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0216 Lele-ChrLele52 1280606 1281622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0216 8 336 Glycosyltransferase AT3G50760 69.883 2.17e-176 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0213 50 1259520 1260536 Lele52g0216 52 1280606 1281622 hybridization