Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0103 ATGATTGCGGAACAGCGGGAAGGCGTGGTCTCAATTGCTAATATCAAAGACACAGCACTCCCAATTCTTCTTCTCTTTGTCTTGTATCGATACCATACGCTCTCGGAATCAACGAAGTGTGCAGAGCGAGGGAGAGAAGCGACAAAGAAGAGGGCTTTCGGCTTTGGCATTTTGGCAAGTCAGGGAGGAGAACGCAGCAAAACGGAAATGCATTATCTTCCGCCAAAATCCCTCGATCTGGGCGGCAATATCCCCTATTGCCTTCCTTTTCCATTAAGAAAGAAGAAACGCGTGCCGCTTGGAACAGCACGATCCAACCCCGTGCAGGATCGATCTTCGCTTCTCATTCAAGCACGCCTCCTTTCTCCCCTTCCAACCATTCTCTCTTCCTCAATTCTATTGGGCATGGCAGCCAATGGAGATATTGACATGCCAGCTTTGAAGTCTGAGCCGAGCCAAACTGATGAATTGTCGAAGCAGGACATGGAAAGAAACCAATCTCAACTGGATGTCATGCAAGAAAAAGTTATGGAGGTTAAGGCTTGCATACAGGGTTCAGAGGAAGATGCAAAAAAGGAGTTAGATGTTCTTTGGCGGAGAGTCAAAACTACTGCCACATTATTGACCTATTTAAAATCCAAGGCTAGAATCATGGTTGTTCCTCATTTAGCCCACGCATCTTGTGGCATTAAACAACTAGAGGGAGTAGGGCTTGTGGACAAAAATGGGATACCATTATCAGGTTGGTCTAGGAATGTCAACGTTCCTTCATTTGACAGTCCAGATGAAGAATCTTGGATAGTAATGAACAGGCAACATGGTTTGGTAGATGAACAAGATGCAGCTTATATAGGTGAGATACTTAAGTCCATTCGGATGGTTGCAGATGTTATGGAAACCCTCGTTAAAAGGGTTTTGTTGGCAGAATCTGAAACTGCAATTGAGAAGGAAAAGGTAACTTTAGGTCAGGAGGAAATTAAGAGGAAGTCTGCCCAGTTAGAGAATATGTCTATGAAATTAGAGGAGATGGAACGCTTTGCTCTGGGCACAAATAGTATTTTGAATGAAATGCGGCAAAGAGTTGAGGATTTGGTGGAAGAAACTACTAGACAAAGACAGCGAGCTGCTGAAAATGAGCAGGAGCTCAATAGAGTGAAACGGGACTTTGAATCTTTGAAATCATATGTTAGCAGTTTAATATCCGTAAGAGAGACCTTACTTTCTTCAGAAAAGCAATTTCAAAGTATTGAGAGGCTGTTTGAACGGTTAGTTGAAAAGACTACACAATTGGAGGGTGAGAAAATGCAGAAAGAGGCTGAAGTTCAGAAACTTATGGAGGAGAACGTGAGGTTAAGTTCTCTGCTTGACAAGAAAGAGGCTCAACTTCTGGCATTGAATGAACAATGCAAGAGAATGAAAAGCTCTAGGAAATTAGCATGTCCCCAAGAACGGAACAACCGTAAAGGAAAGCCGGACGCAGGAAAGGCAACAGAAGAGTACGCCCTCTCCTCTCAACTCAAAACGACCATTTACAGTATAATGTCTCACTCCCTGCCCCTCAGAAATCAAGGGGATCACCAGCCCGATGATGGCTCCTCTGCCACTAAACTATCTCGTCTCAAAATTGGATTACCTTCTGAGGACGCTGACAAGAAGAATGCAAACAAGAGAGTCAAAGATGTTGAAATTTGTGTTCCAATAGTATATGGCACTATTGCTTTCTATCTTGGCCGGAAGGCTAGTGAGGCTCAATCACATAAGTGGACGGTCTATGTACGTGGGGCGTCGAACGAAGATCTTGGGGCGGTCATTAAGCGGGTTGTATTTCAATTGCATCCTAGTTTTAACAACCCTACGCGGGCTGTTGATTCACCGCCATTCGAATTATCGGAATGCGGCTGGGGTGAATTTGAAATCTCCATCACCCTCTTTTTCCACAATGATGTCTGCGATGAACATTTGGATTTGTACCACCATTTGAAATTATATCCTGAGGATGAATCTGGCCCCCAGTCCACCAAGAAACCTGTTGTTGTTGAATCTTACAATGAGATTGTTTTTCCTGATCCCTATGAGGCTTTTCTGGCACGTGCGCGGAATCATCCTGCAGTTATTGTGCCTAGGCTTCCTGCCAGTGTTAACCTACCCAGTCCTGTACCAGTTGAGAGTGTCAATGATAAGGACAGAGCTGATACCAAAGATCATCCTCTAAGCCAGTGGTTCCTGAATTTTTCAGAAGCTGATGAGCTCTTGAAGCTTGCAACAGCGCGCCAAGAGGTGCAAGCTCACATTGCTAAGCTGAGGAGACAGTTGAGTTTGATGGAGGGGTTGACTCCGATGTCAAAACCAGCCTCCGATCGAGTTGAATCTTTCGATTTGTATAAGGCAGGAAGAGATTGCACTTGTAATTTCTTAGGGAAGCATATTGTACGTGGCAGTTGCGTAGTAAAACAGATTGCTCTGTTCTCTTCACTTGGTATTCTGCAATCTGCATTATGGGATGCAATAGGCATATGGAATTCCATGATTCAAAAGGATGTGTCAGTCAAACATGGGTCTATCAACTATGCTTCGATGGTGTAA 2583 0.4417 MIAEQREGVVSIANIKDTALPILLLFVLYRYHTLSESTKCAERGREATKKRAFGFGILASQGGERSKTEMHYLPPKSLDLGGNIPYCLPFPLRKKKRVPLGTARSNPVQDRSSLLIQARLLSPLPTILSSSILLGMAANGDIDMPALKSEPSQTDELSKQDMERNQSQLDVMQEKVMEVKACIQGSEEDAKKELDVLWRRVKTTATLLTYLKSKARIMVVPHLAHASCGIKQLEGVGLVDKNGIPLSGWSRNVNVPSFDSPDEESWIVMNRQHGLVDEQDAAYIGEILKSIRMVADVMETLVKRVLLAESETAIEKEKVTLGQEEIKRKSAQLENMSMKLEEMERFALGTNSILNEMRQRVEDLVEETTRQRQRAAENEQELNRVKRDFESLKSYVSSLISVRETLLSSEKQFQSIERLFERLVEKTTQLEGEKMQKEAEVQKLMEENVRLSSLLDKKEAQLLALNEQCKRMKSSRKLACPQERNNRKGKPDAGKATEEYALSSQLKTTIYSIMSHSLPLRNQGDHQPDDGSSATKLSRLKIGLPSEDADKKNANKRVKDVEICVPIVYGTIAFYLGRKASEAQSHKWTVYVRGASNEDLGAVIKRVVFQLHPSFNNPTRAVDSPPFELSECGWGEFEISITLFFHNDVCDEHLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPDPYEAFLARARNHPAVIVPRLPASVNLPSPVPVESVNDKDRADTKDHPLSQWFLNFSEADELLKLATARQEVQAHIAKLRRQLSLMEGLTPMSKPASDRVESFDLYKAGRDCTCNFLGKHIVRGSCVVKQIALFSSLGILQSALWDAIGIWNSMIQKDVSVKHGSINYASMV 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0103 860 Gene3D YEATS domain 558 711 IPR038704 -
Lele52g0103 860 Coils Coil 323 346 - -
Lele52g0103 860 MobiDBLite consensus disorder prediction 474 497 - -
Lele52g0103 860 CDD YEATS_TFIID14_like 563 694 - -
Lele52g0103 860 Pfam YEATS family 585 664 IPR005033 GO:0006355
Lele52g0103 860 Coils Coil 354 385 - -
Lele52g0103 860 Coils Coil 420 475 - -
Lele52g0103 860 MobiDBLite consensus disorder prediction 474 495 - -
Lele52g0103 860 ProSiteProfiles YEATS domain profile. 557 701 IPR005033 GO:0006355
Lele52g0103 860 PANTHER PROTEIN AF-9 HOMOLOG 552 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0103 Lele-ChrLele52 613314 622788 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0088 49 539976 542892 Lele52g0103 52 613314 622788 hybridization
Lele50g0104 50 631669 634971 Lele52g0103 52 613314 622788 hybridization