Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0081 ATGGCTCCGATGAAGCATTCAGAAAGTACAGGGTCAATGTACCCGGAGGTAATCGAATCCAAACCTGAGCCTTCTGCTCCTCCACTTCCAAATACTAACCCTAATTCTTCGTCCCCCTCCTCTTCGTCCAATCTCTACCCCTCACTTGGCCAGAGCGATTTCTCCCAAAATCTAATTCCTTATGACTACACTCCCAGCACGCCTTTTTCCCCTCCGTTGCCTCACGAATACGAGTTCTCTGCCCCTCCATCGGTTCACGATGAAGAGGTGTTACCGGCTTCAGGAGAGGTTCTTCTCAGGATTCCCGGTGCTGTTCTGAACCTCATTGATCAGCAATACAGCGTCATCATCGCTTCTGGCGATTTTACGGTCATTCGTCTCTGCCAGGGCGGCAACGCCGTCGCTGTCCTCGCCCGCGTTGCCGATAAGATTCAGTGGTCTTTGGCTAAGGACACTGCAGCTGTTAAAGTTGACGACTCGCATTATTTCTTTTCGTTCTTCTTTCCCGATCAGAATGACGTGGGAGAGGTTGGTAAAGGGGATGTTACAAGGTTTGTGTTGAGCTATGGGTTGACGATCGCGGCCAAGGGGCAGGAGGATCTGTTGAAGGAGTTAGATGCGATATTGGAGAATTATAGTAACTTCTCCATGCAGGAGGTGTCTGAGAATGCGAAGAAGGGAGAGGCTTTGGATACCTCGGTGGTTAAGGAAATGTCTCCTGCAGATTTGAATTCAGGGGAGAAGAAGGAATTGATGGAGGGGACATGTGCTGCATATTGGACCACAATAGCTCCAAATGTGGAGGACTATAGTGGAACAGCTGCAAGATTGATTGCACAAGGATCTGGACACCTGATTAAGGGCATATTGTGGTGTGGCGATGTGACGTCAGAGAGGTTGAAAGTGGGAAATGAGGTTTTGAAGACGAAGATGGCTCCAGGGGAAAAGGCAGAAGTTAATCCTGAAACATTAAAACGGATTAAAAGGGTTAAGTCTGTAACTAGAATCACAGAAAAAGTGGCGACTGGGCTCCTCTCTGGGGTCGTGAAAGTCTCTGGAGTATTTGCTAGTTCTGTGGCAAATTCAAAAACAGGAAAGAAAATTATCAAGCTTATACCAGAAGAAGTTTTACTCGCTTCCTTAGATGGATTTGCCAAAGTGTGTGATGCGGTGGAGGTATCTGGAAAACATGTAATGTCAACAACGTCTACCGTGACAACTGACCTTGTGAATCACAGGTATGGAGAAGAAGCTGCAAATGCAACAAATGAAGGGCTCGAAGCCGCAGGTCATGCCGTTGGGGCAGCATGGGCTGTTTTAAAGATTCGGCAGGCCTTCACTCCTAAGGGCGTACTTAAGCCTGTTATGGCTAAATCTGCTGCCGAAGCTGCCGCGGTTGAATTAAGGGAAAAGGAAAACAAGAAAAAATCTGAATTGGAGAAAGAAAAGTGA 1452 0.4738 MAPMKHSESTGSMYPEVIESKPEPSAPPLPNTNPNSSSPSSSSNLYPSLGQSDFSQNLIPYDYTPSTPFSPPLPHEYEFSAPPSVHDEEVLPASGEVLLRIPGAVLNLIDQQYSVIIASGDFTVIRLCQGGNAVAVLARVADKIQWSLAKDTAAVKVDDSHYFFSFFFPDQNDVGEVGKGDVTRFVLSYGLTIAAKGQEDLLKELDAILENYSNFSMQEVSENAKKGEALDTSVVKEMSPADLNSGEKKELMEGTCAAYWTTIAPNVEDYSGTAARLIAQGSGHLIKGILWCGDVTSERLKVGNEVLKTKMAPGEKAEVNPETLKRIKRVKSVTRITEKVATGLLSGVVKVSGVFASSVANSKTGKKIIKLIPEEVLLASLDGFAKVCDAVEVSGKHVMSTTSTVTTDLVNHRYGEEAANATNEGLEAAGHAVGAAWAVLKIRQAFTPKGVLKPVMAKSAAEAAAVELREKENKKKSELEKEK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0081 483 Coils Coil 461 482 - -
Lele52g0081 483 Pfam Senescence domain 277 448 IPR009686 -
Lele52g0081 483 PANTHER SPARTIN 11 471 IPR045036 -
Lele52g0081 483 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0081 Lele-ChrLele52 505721 508570 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0084 50 535077 535911 Lele52g0081 52 505721 508570 hybridization