Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0003 ATGAACAACTTGGATCCGGGGGCCGCGCAGGGACCCGCAGAAGAAGCCTCGCTGAGGATCCAGATCCACCGCCCGTGCCATATGGCGCGTGCCAGAGTGACAAACATGATGGCGGAACTTGAGAAACAACGGCGGCACTTAGATGGCGGTGGAGGAGAAGAGAAACTTTTCAATGGAAGAGAGGAATTTGGTAACTCATCCAACACTTTTAAGCAGATTGTAGCTTTGGCAATTTGGCTGGGAGCTATTCATTTCGACGCTGCGTTGGTCCTCTTCGCGCTCTTATTCTTGCCTCTCTCCAAAGCACTCTTGGTATTTTGTCTGCTTTTCATATTTATGGTGCTTCCCTTAGATGAGAAAAGCCAATTTGGCCGAAAGTTGTCTAGGTACATATGTAAGCATGTTGCCAGTTATTTTCCGGTCACACTTCATGTAGAGGATATTAATGCCTTCCATCCTAATCGTGCTTATGTTTTTGGCTATGAACCACATTCGGTTTTGCCAATTGGCATTTCTGTGCTAGCCCCCCACACCGGTTTCATGCCTCTTCCAAAAATAAGAGTTCTTGCCAGCAGTGCAGTGTTCTACACACCATTTTTGAGACATATATGGACCTGGTTGGGTCTTACACCAGCAACAAAGAAAAATTTTACTTCCCTGTTGGCTGCTGGTTATAGTTGTATTTTAATACCTGGTGGAGTGCAAGAAACGTTTCTCATGGAGCATGGTTCTGAGATTGCCTTCCTTAAGGCTAGAAGAGGATTTGTCCGCATAGCAGTGGAGATGGGCCAACCCTTGGTTCCAGTTTTCTGCTTTGGGCAGTCAGATGTCTATAAGTGGTGGAAACCAACCGGGAAGTTGTTTCTGAAATTTGCCAGGGCTATCAAATTCACCCCAATATATTTTTGGGGAATTCTCGGATCTCCTTTACCATACAGACATTCAATGCATGTGGTGGTGGGTAGACCAATTGAGATAGACAAAAATCCAGAACCAACCATGGAGGAGGTTGCAAAAGTACATGATCGGTTTGTTGAAGCACTTCAAGAGCTATTTGAAAGACACAAAGCTCGGGCTGGATATCCGAACCTTGAGTTAAGAATTGTTTAA 1110 0.4523 MNNLDPGAAQGPAEEASLRIQIHRPCHMARARVTNMMAELEKQRRHLDGGGGEEKLFNGREEFGNSSNTFKQIVALAIWLGAIHFDAALVLFALLFLPLSKALLVFCLLFIFMVLPLDEKSQFGRKLSRYICKHVASYFPVTLHVEDINAFHPNRAYVFGYEPHSVLPIGISVLAPHTGFMPLPKIRVLASSAVFYTPFLRHIWTWLGLTPATKKNFTSLLAAGYSCILIPGGVQETFLMEHGSEIAFLKARRGFVRIAVEMGQPLVPVFCFGQSDVYKWWKPTGKLFLKFARAIKFTPIYFWGILGSPLPYRHSMHVVVGRPIEIDKNPEPTMEEVAKVHDRFVEALQELFERHKARAGYPNLELRIV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0003 369 Pfam Diacylglycerol acyltransferase 94 362 IPR007130 GO:0008374
Lele52g0003 369 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 65 368 - -
Lele52g0003 369 CDD LPLAT_MGAT-like 135 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0003 Lele-ChrLele52 20682 25706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0003 50 369 Acyl Lipid Metabolism Gene Families AT3G51520 65.625 1.58e-156 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0004 50 26900 31834 Lele52g0003 52 20682 25706 hybridization