Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1316 ATGGCTTCTCACACTCGTTTATCTCCTTCTCTCTTTCTCTCTTTCTCCCTTCTTGTTTCTCTCACATGTGGAGTAGGAGCAGCTATTTCTTCTCCCAAGGGCACCAAAATAGGCCAAGGCTATCGCTTAATCTCCATTGAAGAGACTCCTGATGGTGGTCTCATAGGTCACCTTCAGGTGAAGAAGAAGAACAGTATCTACGGTTCTGATATCCCACTCTTGCAGCTCTATGTCAAGCACGAGACGGGGAATCGTTTGAGGGTACACATAACGGACGCAGACAAGCAGAGATGGGAAGTACCGTACAATCTATTGCCGAGGGAGCAACCTCCAGCTCTGAAGCAGACGATTGGAAGGACAAGGAAGAATCTTATAACAGTTTCAGAGTACTCAGGTTCTGAGCTTATTTTCAGCTACACAGCAGATCCATTCAGCTTCTCGGTGAAGAGGAAGTCGAATGGACAGCTTCTCTTCGATTCGAGCTCGTATGAATCAGACGCATATGGTCCAATGGTGTTCAAGGACCAGTACCTTGAGATTTCGACCAAATTACCCAAAGATGCGTCGTTGTATGGCTTGGGGGAGAACACTCAGCCACACGGGATCAAACTTTACCCGAACGATCCATACACTTTATACACAACTGATATTTCAGCCATTAATCTCAATGCTGATCTGTATGGGTCGCACCCTGTGTATATGGATCTTAGAAATGTCGGTGGCGAGCCTTCTGCACATGCTGTTCTGTTGCTGAATAGCAATGGGATGGATGTGTTTTACAGGGGAACTTCTCTGACGTACAAGATTATTGGAGGTGTTTTCGATTTTTACTTCTTTTCAGGGCCTACTCCTCTGAATGTTGTTGATCAGTACACTTCCTTAATTGGCAGACCAGCTCCAATGCCTTACTGGTCATTTGGATTCCACCAATGCAGATGGGGTTACCATAACCTATCAGTTATAGAAGATGTTGTTGACAGTTACAAGAGGGCTCAAATCCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGGGAAAAAGGACTTCACAGTTAACCCAACCAACTACCCCCGTCCAAAGCTTTTGGCCTTCCTAGACAAAATACACCGTATCGGTATGCATTACATTGTCATCATCGATCCAGGGATTGCTGTCAATGCCAGTTATGGTGTCTACCAGAGGGGCATGGCTAATGATGTTTTTATCAAGTATGATGGTGAACCCTTCATGGCCCAAGTTTGGCCAGGGGCAGTATACTTTCCTGATTTTCTTAATCCCAAAACAGTTTCTTGGTGGGGCGATGAGATCCGCCGATTCCATGAACTACTTCCTGTTGATGGCCTATGGATTGACATGAATGAAGTCTCAAACTTCTGTTCAGGAAAGTGTAAAATTCCCAAGGGCAAGCAGTGCCCCACTGGAACCGGACCCGGATGGATCTGTTGCCTAGATTGCAAAAACATTACCAAGACAAGATGGGACGACCCACCCTACAAGATAAATGCTTCAGGAATACAAGCTCCCATTGGCTACAAAACCATAGCCACTAGTGCAGTCCACTACAATGGTGTTTTGGATTATGATGCTCACAGTCTTTATGGTTTCTCCCAATCAATTGCAACACACAAGGGGCTTCAAGGTCTCCAGGGAAAACGACCTTTTATCCTGTCCCGGTCCACTTATGTCGGTTCAGGCAAATATGCTGCTCACTGGACTGGTGACAACAAGGGCACGTGGGAGGACTTGAGGTACTCCATATCTACAATGCTAAACTTTGGCATTTTTGGGGTTCCAATGGTTGGTTCAGATATCTGCGGCTTCTATCCAGCGCCAACCGAAGAGCTTTGCAACCGGTGGATCGAAGTAGGTGCCTTCTACCCATTTTCAAGGGATCATGCAAACTACTACTCCCCAAGACAAGAGCTTTACCAATGGGAATCAGTCGCCGAGTCTGCTCGCAACGCCTTGGGTATGAGATATAAGCTCCTCCCTTACCTCTACACATTGAACTATGAGGCTCATATTAGTGGAGCCCCAATAGCCAGGCCACTGTTCTTCTCATTCCCAAGCTACACTGCATGTTATGGCACCAGCACCCAATTCTTGCTAGGAAAAGGTCTTATGATCTCTCCAGTGCTTGAGCAGGGAAAAACACAAGTGAATGCTCTCTTCCCTCCTGGCACCTGGTACAGTTTGTCAGATCCGACATTATTCGTTACATCGAAGAACGGAGTCAATGTCAACCTCGACGCACCACTGCATGTGGTCAATGTCCATTTGTATCAGAACATCATTCTCCCTATGCAACGGGGAGGATTGCTTTCCAAGGAAGCCAGAATGACGCCATTCACGCTCGTGGTGACCTTCCCGTCTGGCGCCACCGAAGGAGAAGCTCAAGGGAACCTGTACCTCGACGACGACGAGCTGCCCGAAATGAAGCTTGGAAATGGGTATTCAACATACGTTGATTTCTATGCAAGTTTGAAACAGGGAAGGGTTAAGATTTGGTCAAAAGTCCAAGAGGGCAAGTTTGCTTTGGACAAAGGCTGGACTATTGAGAAGGTATCTCTAATGGGAATAGAAGGAAGTGCTTCTCCATCGTCACTTGAACTTGATGGTATTTCTCTGGTGGACGGAGAGGTTCGTACATCAGAACTGAAGTACTCGCCGGAGGGACAAGAAGATTATGAGCAGAAGGCAATGATGGTGGACGTGAGTGGCTTGAAAATCCCAGTGGGTAAAAATTTTGCAATGACCTGGAAAATGGGAGTTTCTCGTTGA 2787 0.4647 MASHTRLSPSLFLSFSLLVSLTCGVGAAISSPKGTKIGQGYRLISIEETPDGGLIGHLQVKKKNSIYGSDIPLLQLYVKHETGNRLRVHITDADKQRWEVPYNLLPREQPPALKQTIGRTRKNLITVSEYSGSELIFSYTADPFSFSVKRKSNGQLLFDSSSYESDAYGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDLRNVGGEPSAHAVLLLNSNGMDVFYRGTSLTYKIIGGVFDFYFFSGPTPLNVVDQYTSLIGRPAPMPYWSFGFHQCRWGYHNLSVIEDVVDSYKRAQIPLDVIWNDDDHMDGKKDFTVNPTNYPRPKLLAFLDKIHRIGMHYIVIIDPGIAVNASYGVYQRGMANDVFIKYDGEPFMAQVWPGAVYFPDFLNPKTVSWWGDEIRRFHELLPVDGLWIDMNEVSNFCSGKCKIPKGKQCPTGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSAVHYNGVLDYDAHSLYGFSQSIATHKGLQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPSYTACYGTSTQFLLGKGLMISPVLEQGKTQVNALFPPGTWYSLSDPTLFVTSKNGVNVNLDAPLHVVNVHLYQNIILPMQRGGLLSKEARMTPFTLVVTFPSGATEGEAQGNLYLDDDELPEMKLGNGYSTYVDFYASLKQGRVKIWSKVQEGKFALDKGWTIEKVSLMGIEGSASPSSLELDGISLVDGEVRTSELKYSPEGQEDYEQKAMMVDVSGLKIPVGKNFAMTWKMGVSR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1316 928 Gene3D - 766 927 IPR013780 -
Lele51g1316 928 Pfam Galactose mutarotase-like 188 256 IPR025887 -
Lele51g1316 928 FunFam Alpha-glucosidase 1 664 764 - -
Lele51g1316 928 CDD GH31_N 178 296 - -
Lele51g1316 928 Gene3D - 664 763 IPR013780 -
Lele51g1316 928 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 54 186 IPR031727 -
Lele51g1316 928 FunFam Maltase-glucoamylase, intestinal 298 663 - -
Lele51g1316 928 SUPERFAMILY Galactose mutarotase-like 36 284 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele51g1316 928 Pfam Glycosyl hydrolases family 31 277 767 IPR000322 GO:0004553|GO:0005975
Lele51g1316 928 Gene3D glycosyl hydrolase (family 31) 34 297 - -
Lele51g1316 928 ProSitePatterns Glycosyl hydrolases family 31 active site. 449 456 IPR030458 -
Lele51g1316 928 CDD GH31_MGAM_SI_GAA 296 676 - -
Lele51g1316 928 FunFam Alpha-glucosidase 1 34 297 - -
Lele51g1316 928 PANTHER ALPHA-GLUCOSIDASE 59 887 - -
Lele51g1316 928 SUPERFAMILY (Trans)glycosidases 287 679 IPR017853 -
Lele51g1316 928 Gene3D Glycosidases 298 663 - -
Lele51g1316 928 SUPERFAMILY Glycosyl hydrolase domain 681 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1316 Lele-ChrLele51 8894736 8899079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1316 37 927 Glycoside Hydrolase AT1G68560 75.224 0.0 1450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1316 51 8894736 8899079 Lele51g1316 51 8894736 8899079 ECH
Lele49g1311 49 8933177 8937516 Lele51g1316 51 8894736 8899079 hybridization
Lele50g1519 50 20338634 20343065 Lele51g1316 51 8894736 8899079 hybridization